elastic-arm-f5251078: building wb3zwpka3mccyw3b26m3knycg6xb5yn1-kent-404.drv Running phase: unpackPhase unpacking sources unpacking source archive /nix/store/ljvl5nvd3x98x9bsdq7cgs5v3i85g4i1-source source root is source Running phase: patchPhase patching sources Running phase: updateAutotoolsGnuConfigScriptsPhase updateAutotoolsGnuConfigScriptsPhase Running phase: configurePhase configuring no configure script, doing nothing Running phase: buildPhase building cd lib && make make[1]: Entering directory '/build/source/src/lib' gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o aliType.o -c aliType.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o annoAssembly.o -c annoAssembly.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o annoFilter.o -c annoFilter.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o annoFormatter.o -c annoFormatter.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o annoFormatTab.o -c annoFormatTab.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o annoGrator.o -c annoGrator.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o annoGrateWig.o -c annoGrateWig.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o annoGratorQuery.o -c annoGratorQuery.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o annoOption.o -c annoOption.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o annoRow.o -c annoRow.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o annoStreamer.o -c annoStreamer.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o annoStreamBigBed.o -c annoStreamBigBed.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o annoStreamBigWig.o -c annoStreamBigWig.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o annoStreamTab.o -c annoStreamTab.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o annoStreamLongTabix.o -c annoStreamLongTabix.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o annoStreamVcf.o -c annoStreamVcf.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o apacheLog.o -c apacheLog.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o asParse.o -c asParse.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o aveStats.o -c aveStats.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o axt.o -c axt.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o axtAffine.o -c axtAffine.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o bamFile.o -c bamFile.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o base64.o -c base64.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o basicBed.o -c basicBed.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o bbiRead.o -c bbiRead.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o bbiWrite.o -c bbiWrite.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o bedTabix.o -c bedTabix.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o bigBed.o -c bigBed.c bigBed.c: In function 'extractField': bigBed.c:314:2: warning: '%s' directive argument is null [-Wformat-overflow=] 314 | warn("Not enough fields in extractField of %s", line); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o binRange.o -c binRange.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o bits.o -c bits.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o blastOut.o -c blastOut.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o blastParse.o -c blastParse.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o boxClump.o -c boxClump.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o boxLump.o -c boxLump.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o bPlusTree.o -c bPlusTree.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o bwgCreate.o -c bwgCreate.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o bwgQuery.o -c bwgQuery.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o bwgValsOnChrom.o -c bwgValsOnChrom.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o cda.o -c cda.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o chain.o -c chain.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o chainBlock.o -c chainBlock.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o chainConnect.o -c chainConnect.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o chainToAxt.o -c chainToAxt.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o chainToPsl.o -c chainToPsl.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o cheapcgi.o -c cheapcgi.c In file included from /nix/store/fwc8330z3yk4m3npi5n01qvxyvhn7rsc-glibc-2.35-224-dev/include/stdio.h:906, from ../inc/common.h:30, from cheapcgi.c:7: In function 'fprintf', inlined from 'catchSignal' at cheapcgi.c:1022:5: /nix/store/fwc8330z3yk4m3npi5n01qvxyvhn7rsc-glibc-2.35-224-dev/include/bits/stdio2.h:79:10: warning: '%s' directive argument is null [-Wformat-overflow=] 79 | return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o cirTree.o -c cirTree.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o codebias.o -c codebias.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o colHash.o -c colHash.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o common.o -c common.c In file included from /nix/store/fwc8330z3yk4m3npi5n01qvxyvhn7rsc-glibc-2.35-224-dev/include/string.h:535, from ../inc/common.h:33, from common.c:7: In function 'strncpy', inlined from 'vatruncatef' at common.c:3381:5: /nix/store/fwc8330z3yk4m3npi5n01qvxyvhn7rsc-glibc-2.35-224-dev/include/bits/string_fortified.h:95:10: warning: '__builtin_strncpy' output truncated before terminating nul copying 12 bytes from a string of the same length [-Wstringop-truncation] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o correlate.o -c correlate.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o crTree.o -c crTree.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o csv.o -c csv.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o dgRange.o -c dgRange.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o diGraph.o -c diGraph.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o dlist.o -c dlist.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o dnaLoad.o -c dnaLoad.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o dnaMarkov.o -c dnaMarkov.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o dnaMotif.o -c dnaMotif.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o dnaseq.o -c dnaseq.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o dnautil.o -c dnautil.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o dtdParse.o -c dtdParse.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o dyOut.o -c dyOut.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o dystring.o -c dystring.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o elmTree.o -c elmTree.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o emblParse.o -c emblParse.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o errCatch.o -c errCatch.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o errAbort.o -c errAbort.c errAbort.c: In function 'getThreadVars': errAbort.c:345:5: warning: ignoring return value of 'write', declared with attribute warn_unused_result [-Wunused-result] 345 | write(STDERR_FILENO, errMsg, strlen(errMsg)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o fa.o -c fa.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o ffAli.o -c ffAli.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o ffScore.o -c ffScore.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o fieldedTable.o -c fieldedTable.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o filePath.o -c filePath.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o fixColor.o -c fixColor.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o flydna.o -c flydna.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o fof.o -c fof.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o font/mgCourier10.o -c font/mgCourier10.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o font/mgCourier12.o -c font/mgCourier12.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o font/mgCourier14.o -c font/mgCourier14.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o font/mgCourier18.o -c font/mgCourier18.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o font/mgCourier24.o -c font/mgCourier24.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o font/mgCourier34.o -c font/mgCourier34.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o font/mgCourier8.o -c font/mgCourier8.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o font/mgHelvetica10.o -c font/mgHelvetica10.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o font/mgHelvetica12.o -c font/mgHelvetica12.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o font/mgHelvetica14.o -c font/mgHelvetica14.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o font/mgHelvetica18.o -c font/mgHelvetica18.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o font/mgHelvetica24.o -c font/mgHelvetica24.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o font/mgHelvetica34.o -c font/mgHelvetica34.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o font/mgHelvetica8.o -c font/mgHelvetica8.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o font/mgHelveticaBold10.o -c font/mgHelveticaBold10.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o font/mgHelveticaBold12.o -c font/mgHelveticaBold12.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o font/mgHelveticaBold14.o -c font/mgHelveticaBold14.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o font/mgHelveticaBold18.o -c font/mgHelveticaBold18.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o font/mgHelveticaBold24.o -c font/mgHelveticaBold24.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o font/mgHelveticaBold34.o -c font/mgHelveticaBold34.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o font/mgHelveticaBold8.o -c font/mgHelveticaBold8.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o font/mgSixhi6.o -c font/mgSixhi6.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o font/mgSail8.o -c font/mgSail8.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o font/mgTimes10.o -c font/mgTimes10.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o font/mgTimes12.o -c font/mgTimes12.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o font/mgTimes14.o -c font/mgTimes14.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o font/mgTimes18.o -c font/mgTimes18.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o font/mgTimes24.o -c font/mgTimes24.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o font/mgTimes34.o -c font/mgTimes34.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o font/mgTimes8.o -c font/mgTimes8.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o font/mgMenlo12.o -c font/mgMenlo12.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o fq.o -c fq.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o freeType.o -c freeType.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o fuzzyShow.o -c fuzzyShow.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o gapCalc.o -c gapCalc.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o gdf.o -c gdf.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o gemfont.o -c gemfont.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o genomeRangeTree.o -c genomeRangeTree.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o gfNet.o -c gfNet.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o gff.o -c gff.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o gff3.o -c gff3.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o gfxPoly.o -c gfxPoly.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o gifLabel.o -c gifLabel.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o hacTree.o -c hacTree.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o hash.o -c hash.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o hex.o -c hex.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o histogram.o -c histogram.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o hmmPfamParse.o -c hmmPfamParse.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o hmmstats.o -c hmmstats.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o htmlColor.o -c htmlColor.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o htmlPage.o -c htmlPage.c gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_aarch64 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/ppy3955qj5gwvn7n1ssdhhscmlc6pryg-libpng-apng-1.6.37-dev/include/libpng16 -o htmshell.o -c htmshell.c htmshell.c: In function 'htmlVaBadRequestAbort': htmshell.c:714:28: error: invalid operands to binary != (have 'va_list' {aka '__va_list'} and 'void *') 714 | if (format != NULL && args != NULL) | ^~ make[1]: *** [../inc/common.mk:447: htmshell.o] Error 1 make[1]: Leaving directory '/build/source/src/lib' make: *** [makefile:19: topLibs] Error 2