kent-404 log

failed `kent-404` `checks.i686-linux.kent` · build #2 · raw

unpackPhase

1unpacking sources2unpacking source archive /nix/store/ljvl5nvd3x98x9bsdq7cgs5v3i85g4i1-source3source root is source4unpackPhase completed in 48 seconds

patchPhase

5patching sources

configurePhase

6configuring7no configure script, doing nothing

buildPhase

8building9cd lib && make10make[1]: Entering directory '/build/source/src/lib'11gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o aliType.o -c aliType.c12gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o annoAssembly.o -c annoAssembly.c13gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o annoFilter.o -c annoFilter.c14gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o annoFormatter.o -c annoFormatter.c15gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o annoFormatTab.o -c annoFormatTab.c16gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o annoGrator.o -c annoGrator.c17gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o annoGrateWig.o -c annoGrateWig.c18gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o annoGratorQuery.o -c annoGratorQuery.c19gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o annoOption.o -c annoOption.c20gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o annoRow.o -c annoRow.c21gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o annoStreamer.o -c annoStreamer.c22gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o annoStreamBigBed.o -c annoStreamBigBed.c23gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o annoStreamBigWig.o -c annoStreamBigWig.c24gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o annoStreamTab.o -c annoStreamTab.c25gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o annoStreamLongTabix.o -c annoStreamLongTabix.c26gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o annoStreamVcf.o -c annoStreamVcf.c27gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o apacheLog.o -c apacheLog.c28gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o asParse.o -c asParse.c29gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o aveStats.o -c aveStats.c30gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o axt.o -c axt.c31gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o axtAffine.o -c axtAffine.c32gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o bamFile.o -c bamFile.c33gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o base64.o -c base64.c34gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o basicBed.o -c basicBed.c35gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o bbiRead.o -c bbiRead.c36gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o bbiWrite.o -c bbiWrite.c37gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o bedTabix.o -c bedTabix.c38gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o bigBed.o -c bigBed.c39bigBed.c: In function 'extractField':40bigBed.c:314:9: warning: '%s' directive argument is null [-Wformat-overflow=]41 314 | warn("Not enough fields in extractField of %s", line);42 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~43gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o binRange.o -c binRange.c44gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o bits.o -c bits.c45gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o blastOut.o -c blastOut.c46gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o blastParse.o -c blastParse.c47gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o boxClump.o -c boxClump.c48gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o boxLump.o -c boxLump.c49gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o bPlusTree.o -c bPlusTree.c50gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o bwgCreate.o -c bwgCreate.c51gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o bwgQuery.o -c bwgQuery.c52gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o bwgValsOnChrom.o -c bwgValsOnChrom.c53gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o cda.o -c cda.c54gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o chain.o -c chain.c55gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o chainBlock.o -c chainBlock.c56gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o chainConnect.o -c chainConnect.c57gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o chainToAxt.o -c chainToAxt.c58gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o chainToPsl.o -c chainToPsl.c59gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o cheapcgi.o -c cheapcgi.c60In file included from /nix/store/7vm0cxq48wb5sgsq20a6f5w8a42lgcfm-glibc-2.35-224-dev/include/stdio.h:906,61 from ../inc/common.h:30,62 from cheapcgi.c:7:63In function 'fprintf',64 inlined from 'catchSignal' at cheapcgi.c:1022:5:65/nix/store/7vm0cxq48wb5sgsq20a6f5w8a42lgcfm-glibc-2.35-224-dev/include/bits/stdio2.h:79:10: warning: '%s' directive argument is null [-Wformat-overflow=]66 79 | return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt,67 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~68 80 | __va_arg_pack ());69 | ~~~~~~~~~~~~~~~~~70gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o cirTree.o -c cirTree.c71gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o codebias.o -c codebias.c72gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o colHash.o -c colHash.c73gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o common.o -c common.c74In file included from /nix/store/7vm0cxq48wb5sgsq20a6f5w8a42lgcfm-glibc-2.35-224-dev/include/string.h:535,75 from ../inc/common.h:33,76 from common.c:7:77In function 'strncpy',78 inlined from 'vatruncatef' at common.c:3381:5:79/nix/store/7vm0cxq48wb5sgsq20a6f5w8a42lgcfm-glibc-2.35-224-dev/include/bits/string_fortified.h:95:10: warning: '__builtin_strncpy' output truncated before terminating nul copying 12 bytes from a string of the same length [-Wstringop-truncation]80 95 | return __builtin___strncpy_chk (__dest, __src, __len,81 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~82 96 | __glibc_objsize (__dest));83 | ~~~~~~~~~~~~~~~~~~~~~~~~~84gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o correlate.o -c correlate.c85gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o crTree.o -c crTree.c86gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o csv.o -c csv.c87gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o dgRange.o -c dgRange.c88gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o diGraph.o -c diGraph.c89gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o dlist.o -c dlist.c90gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o dnaLoad.o -c dnaLoad.c91gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o dnaMarkov.o -c dnaMarkov.c92gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o dnaMotif.o -c dnaMotif.c93gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o dnaseq.o -c dnaseq.c94gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o dnautil.o -c dnautil.c95gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o dtdParse.o -c dtdParse.c96gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o dyOut.o -c dyOut.c97gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o dystring.o -c dystring.c98gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o elmTree.o -c elmTree.c99gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o emblParse.o -c emblParse.c100gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o errCatch.o -c errCatch.c101gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o errAbort.o -c errAbort.c102errAbort.c: In function 'getThreadVars':103errAbort.c:345:5: warning: ignoring return value of 'write' declared with attribute 'warn_unused_result' [-Wunused-result]104 345 | write(STDERR_FILENO, errMsg, strlen(errMsg));105 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~106gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o fa.o -c fa.c107gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o ffAli.o -c ffAli.c108gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE 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-I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o font/mgHelvetica18.o -c font/mgHelvetica18.c125gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o font/mgHelvetica24.o -c font/mgHelvetica24.c126gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o font/mgHelvetica34.o -c font/mgHelvetica34.c127gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o font/mgHelvetica8.o -c font/mgHelvetica8.c128gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o font/mgHelveticaBold10.o -c font/mgHelveticaBold10.c129gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o font/mgHelveticaBold12.o -c font/mgHelveticaBold12.c130gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o font/mgHelveticaBold14.o -c font/mgHelveticaBold14.c131gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o font/mgHelveticaBold18.o -c font/mgHelveticaBold18.c132gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat 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-DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o font/mgHelveticaBold8.o -c font/mgHelveticaBold8.c135gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o font/mgSixhi6.o -c font/mgSixhi6.c136gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o font/mgSail8.o -c font/mgSail8.c137gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o font/mgTimes10.o -c font/mgTimes10.c138gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall 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-I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o gff3.o -c gff3.c155gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o gfxPoly.o -c gfxPoly.c156gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o gifLabel.o -c gifLabel.c157gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o hacTree.o -c hacTree.c158gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o hash.o -c hash.c159gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o hex.o -c hex.c160gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o histogram.o -c histogram.c161gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o hmmPfamParse.o -c hmmPfamParse.c162gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o hmmstats.o -c hmmstats.c163gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o htmlColor.o -c htmlColor.c164gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o htmlPage.o -c htmlPage.c165gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o htmshell.o -c htmshell.c166gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o hmac.o -c hmac.c167gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o https.o -c https.c168https.c: In function 'openSslInit':169https.c:77:5: warning: 'ERR_load_SSL_strings' is deprecated: Since OpenSSL 3.0 [-Wdeprecated-declarations]170 77 | ERR_load_SSL_strings();171 | ^~~~~~~~~~~~~~~~~~~~172In file included from /nix/store/y25ymccx6bh1ahj2yxphda9rsmvjlyj8-openssl-3.0.7-dev/include/openssl/sslerr.h:17,173 from /nix/store/y25ymccx6bh1ahj2yxphda9rsmvjlyj8-openssl-3.0.7-dev/include/openssl/ssl.h:43,174 from https.c:6:175/nix/store/y25ymccx6bh1ahj2yxphda9rsmvjlyj8-openssl-3.0.7-dev/include/openssl/sslerr_legacy.h:29:27: note: declared here176 29 | OSSL_DEPRECATEDIN_3_0 int ERR_load_SSL_strings(void);177 | ^~~~~~~~~~~~~~~~~~~~178At top level:179https.c:27:13: warning: 'openssl_locking_callback' defined but not used [-Wunused-function]180 27 | static void openssl_locking_callback(int mode, int n, const char * file, int line)181 | ^~~~~~~~~~~~~~~~~~~~~~~~182https.c:22:22: warning: 'openssl_id_callback' defined but not used [-Wunused-function]183 22 | static unsigned long openssl_id_callback(void)184 | ^~~~~~~~~~~~~~~~~~~185gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o intExp.o -c intExp.c186gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o intValTree.o -c intValTree.c187gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o internet.o -c internet.c188gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o itsa.o -c itsa.c189gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o iupac.o -c iupac.c190gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o jointalign.o -c jointalign.c191gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o jpegSize.o -c jpegSize.c192gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o jsonParse.o -c jsonParse.c193gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o jsonQuery.o -c jsonQuery.c194gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o jsonWrite.o -c jsonWrite.c195gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o keys.o -c keys.c196gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o knetUdc.o -c knetUdc.c197gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o kxTok.o -c kxTok.c198gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o linefile.o -c linefile.c199gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o lineFileOnBigBed.o -c lineFileOnBigBed.c200gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o localmem.o -c localmem.c201gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o log.o -c log.c202log.c: In function 'logDaemonize':203log.c:344:5: warning: ignoring return value of 'dup' declared with attribute 'warn_unused_result' [-Wunused-result]204 344 | dup(nullFd); // Stdout goes also to /dev/null205 | ^~~~~~~~~~~206log.c:345:5: warning: ignoring return value of 'dup' declared with attribute 'warn_unused_result' [-Wunused-result]207 345 | dup(nullFd); // Stderr goes also to /dev/null208 | ^~~~~~~~~~~209gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o longTabix.o -c longTabix.c210gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o longToList.o -c longToList.c211gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o maf.o -c maf.c212gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o mafFromAxt.o -c mafFromAxt.c213gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o mafScore.o -c mafScore.c214gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o mailViaPipe.o -c mailViaPipe.c215gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o md5.o -c md5.c216gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o memalloc.o -c memalloc.c217memalloc.c: In function 'carefulAlloc':218memalloc.c:317:5: warning: ignoring return value of 'write' declared with attribute 'warn_unused_result' [-Wunused-result]219 317 | write(STDERR_FILENO, errMsg, strlen(errMsg));220 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~221gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o memgfx.o -c memgfx.c222gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o meta.o -c meta.c223gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o metaWig.o -c metaWig.c224gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o mgCircle.o -c mgCircle.c225gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o mgPolygon.o -c mgPolygon.c226gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o mime.o -c mime.c227gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o net.o -c net.c228net.c: In function 'netConnectWithTimeoutOneAddr':229net.c:131:38: warning: passing argument 3 to 'restrict'-qualified parameter aliases with argument 4 [-Wrestrict]230 131 | res = select(sd+1, NULL, &mySet, &mySet, &tempTime);231 | ^~~~~~ ~~~~~~232gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o nib.o -c nib.c233gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o nibTwo.o -c nibTwo.c234gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o nt4.o -c nt4.c235gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o numObscure.o -c numObscure.c236gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o obscure.o -c obscure.c237gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o oldGff.o -c oldGff.c238gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o oligoTm.o -c oligoTm.c239gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o options.o -c options.c240gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o osunix.o -c osunix.c241gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc 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-I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o vcf.o -c vcf.c314gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o vcfBits.o -c vcfBits.c315gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o vGfx.o -c vGfx.c316gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o vPng.o -c vPng.c317gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o verbose.o -c verbose.c318gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o wildcmp.o -c wildcmp.c319gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o windowsToAscii.o -c windowsToAscii.c320gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o wormdna.o -c wormdna.c321gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o xAli.o -c xAli.c322gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o xa.o -c xa.c323gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o xap.o -c xap.c324gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o xenshow.o -c xenshow.c325gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o xmlEscape.o -c xmlEscape.c326gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o xp.o -c xp.c327gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o zlibFace.o -c zlibFace.c328ar rcus i686/jkweb.a aliType.o annoAssembly.o annoFilter.o annoFormatter.o annoFormatTab.o annoGrator.o annoGrateWig.o annoGratorQuery.o annoOption.o annoRow.o annoStreamer.o annoStreamBigBed.o annoStreamBigWig.o annoStreamTab.o annoStreamLongTabix.o annoStreamVcf.o apacheLog.o asParse.o aveStats.o axt.o axtAffine.o bamFile.o base64.o basicBed.o bbiRead.o bbiWrite.o bedTabix.o bigBed.o binRange.o bits.o blastOut.o blastParse.o boxClump.o boxLump.o bPlusTree.o bwgCreate.o bwgQuery.o bwgValsOnChrom.o cda.o chain.o chainBlock.o chainConnect.o chainToAxt.o chainToPsl.o cheapcgi.o cirTree.o codebias.o colHash.o common.o correlate.o crTree.o csv.o dgRange.o diGraph.o dlist.o dnaLoad.o dnaMarkov.o dnaMotif.o dnaseq.o dnautil.o dtdParse.o dyOut.o dystring.o elmTree.o emblParse.o errCatch.o errAbort.o fa.o ffAli.o ffScore.o fieldedTable.o filePath.o fixColor.o flydna.o fof.o font/mgCourier10.o font/mgCourier12.o font/mgCourier14.o font/mgCourier18.o font/mgCourier24.o font/mgCourier34.o font/mgCourier8.o font/mgHelvetica10.o font/mgHelvetica12.o font/mgHelvetica14.o font/mgHelvetica18.o font/mgHelvetica24.o font/mgHelvetica34.o font/mgHelvetica8.o font/mgHelveticaBold10.o font/mgHelveticaBold12.o font/mgHelveticaBold14.o font/mgHelveticaBold18.o font/mgHelveticaBold24.o font/mgHelveticaBold34.o font/mgHelveticaBold8.o font/mgSixhi6.o font/mgSail8.o font/mgTimes10.o font/mgTimes12.o font/mgTimes14.o font/mgTimes18.o font/mgTimes24.o font/mgTimes34.o font/mgTimes8.o font/mgMenlo12.o fq.o freeType.o fuzzyShow.o gapCalc.o gdf.o gemfont.o genomeRangeTree.o gfNet.o gff.o gff3.o gfxPoly.o gifLabel.o hacTree.o hash.o hex.o histogram.o hmmPfamParse.o hmmstats.o htmlColor.o htmlPage.o htmshell.o hmac.o https.o intExp.o intValTree.o internet.o itsa.o iupac.o jointalign.o jpegSize.o jsonParse.o jsonQuery.o jsonWrite.o keys.o knetUdc.o kxTok.o linefile.o lineFileOnBigBed.o localmem.o log.o longTabix.o longToList.o maf.o mafFromAxt.o mafScore.o mailViaPipe.o md5.o memalloc.o memgfx.o meta.o metaWig.o mgCircle.o mgPolygon.o mime.o net.o nib.o nibTwo.o nt4.o numObscure.o obscure.o oldGff.o oligoTm.o options.o osunix.o pairHmm.o pairDistance.o paraFetch.o peakCluster.o phyloTree.o pipeline.o portimpl.o pngwrite.o psGfx.o psPoly.o pscmGfx.o psl.o pslGenoShow.o pslShow.o pslTbl.o pslTransMap.o pthreadDoList.o pthreadWrap.o qa.o quickHeap.o quotedP.o ra.o rainbow.o raToStruct.o rbTree.o rangeTree.o regexHelper.o repMask.o rle.o rnautil.o rqlEval.o rqlParse.o rqlToSql.o rudp.o scoreWindow.o seg.o seqOut.o seqStats.o servBrcMcw.o servCrunx.o servcis.o servcl.o servmsII.o servpws.o shaRes.o slog.o snof.o snofmake.o snofsig.o spaceSaver.o spacedColumn.o spacedSeed.o splatAli.o sqlList.o sqlNum.o sqlReserved.o strex.o subText.o sufa.o sufx.o synQueue.o tabRow.o tagSchema.o tagStorm.o tagToJson.o tagToSql.o textOut.o tokenizer.o trix.o twoBit.o udc.o uuid.o vcf.o vcfBits.o vGfx.o vPng.o verbose.o wildcmp.o windowsToAscii.o wormdna.o xAli.o xa.o xap.o xenshow.o xmlEscape.o xp.o zlibFace.o329ar: `u' modifier ignored since `D' is the default (see `U')330make[1]: Leaving directory '/build/source/src/lib'331cd jkOwnLib && make332make[1]: Entering directory '/build/source/src/jkOwnLib'333gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o bandExt.o -c bandExt.c334gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o crudeali.o -c crudeali.c335gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o ffAliHelp.o -c ffAliHelp.c336gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o ffSeedExtend.o -c ffSeedExtend.c337gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o fuzzyFind.o -c fuzzyFind.c338gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o genoFind.o -c genoFind.c339gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o gfBlatLib.o -c gfBlatLib.c340gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o gfClientLib.o -c gfClientLib.c341gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o gfInternal.o -c gfInternal.c342gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o gfOut.o -c gfOut.c343gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o gfPcrLib.o -c gfPcrLib.c344gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o gfWebLib.o -c gfWebLib.c345gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o ooc.o -c ooc.c346gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o patSpace.o -c patSpace.c347gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o splix.o -c splix.c348gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o supStitch.o -c supStitch.c349gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o trans3.o -c trans3.c350gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o xenbig.o -c xenbig.c351gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o xensmall.o -c xensmall.c352ar rcus ../lib/i686/jkOwnLib.a bandExt.o crudeali.o ffAliHelp.o ffSeedExtend.o fuzzyFind.o genoFind.o gfBlatLib.o gfClientLib.o gfInternal.o gfOut.o gfPcrLib.o gfWebLib.o ooc.o patSpace.o splix.o supStitch.o trans3.o xenbig.o xensmall.o 353ar: `u' modifier ignored since `D' is the default (see `U')354make[1]: Leaving directory '/build/source/src/jkOwnLib'355cd parasol/lib && make356make[1]: Entering directory '/build/source/src/parasol/lib'357gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o broadData.o -c broadData.c358gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o paraLib.o -c paraLib.c359gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o paraMessage.o -c paraMessage.c360gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o machSpec.o -c machSpec.c361gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o jobResult.o -c jobResult.c362mkdir -p i686363ar rcu i686/paralib.a broadData.o paraLib.o paraMessage.o machSpec.o jobResult.o364ar: `u' modifier ignored since `D' is the default (see `U')365ranlib i686/paralib.a366make[1]: Leaving directory '/build/source/src/parasol/lib'367cd htslib && make368make[1]: Entering directory '/build/source/src/htslib'369gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -DKNETFILE_HOOKS -DUCSC_CRAM -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o kfunc.o -c kfunc.c370gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -DKNETFILE_HOOKS -DUCSC_CRAM -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o knetfile.o -c knetfile.c371gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -DKNETFILE_HOOKS -DUCSC_CRAM -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o kstring.o -c kstring.c372gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -DKNETFILE_HOOKS -DUCSC_CRAM -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o bgzf.o -c bgzf.c373gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -DKNETFILE_HOOKS -DUCSC_CRAM -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o faidx.o -c faidx.c374gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -DKNETFILE_HOOKS -DUCSC_CRAM -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o hfile.o -c hfile.c375gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -DKNETFILE_HOOKS -DUCSC_CRAM -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o hfile_net.o -c hfile_net.c376echo '#define HTS_VERSION "1.3"' > version.h377gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -DKNETFILE_HOOKS -DUCSC_CRAM -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o hts.o -c hts.c378hts.c: In function 'hts_idx_init':379hts.c:1180:59: warning: overflow in conversion from 'uint32_t' {aka 'unsigned int'} to 'int' changes value from 'idx->z.last_bin = 4294967295' to '-1' [-Woverflow]380 1180 | idx->z.save_bin = idx->z.save_tid = idx->z.last_tid = idx->z.last_bin = 0xffffffffu;381 | ^~~382gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -DKNETFILE_HOOKS -DUCSC_CRAM -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o md5.o -c md5.c383gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -DKNETFILE_HOOKS -DUCSC_CRAM -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o regidx.o -c regidx.c384gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -DKNETFILE_HOOKS -DUCSC_CRAM -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o sam.o -c sam.c385In file included from /nix/store/7vm0cxq48wb5sgsq20a6f5w8a42lgcfm-glibc-2.35-224-dev/include/string.h:535,386 from sam.c:30:387In function 'strncpy',388 inlined from 'bam_hdr_write' at sam.c:232:5:389/nix/store/7vm0cxq48wb5sgsq20a6f5w8a42lgcfm-glibc-2.35-224-dev/include/bits/string_fortified.h:95:10: warning: '__builtin_strncpy' output truncated before terminating nul copying 4 bytes from a string of the same length [-Wstringop-truncation]390 95 | return __builtin___strncpy_chk (__dest, __src, __len,391 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~392 96 | __glibc_objsize (__dest));393 | ~~~~~~~~~~~~~~~~~~~~~~~~~394gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -DKNETFILE_HOOKS -DUCSC_CRAM -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o synced_bcf_reader.o -c synced_bcf_reader.c395gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -DKNETFILE_HOOKS -DUCSC_CRAM -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o vcf_sweep.o -c vcf_sweep.c396gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -DKNETFILE_HOOKS -DUCSC_CRAM -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o tbx.o -c tbx.c397gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -DKNETFILE_HOOKS -DUCSC_CRAM -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o vcf.o -c vcf.c398gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -DKNETFILE_HOOKS -DUCSC_CRAM -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o vcfutils.o -c vcfutils.c399gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -DKNETFILE_HOOKS -DUCSC_CRAM -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o cram/cram_codecs.o -c cram/cram_codecs.c400gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -DKNETFILE_HOOKS -DUCSC_CRAM -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o cram/cram_decode.o -c cram/cram_decode.c401gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -DKNETFILE_HOOKS -DUCSC_CRAM -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o cram/cram_encode.o -c cram/cram_encode.c402gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -DKNETFILE_HOOKS -DUCSC_CRAM -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o cram/cram_external.o -c cram/cram_external.c403gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -DKNETFILE_HOOKS -DUCSC_CRAM -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o cram/cram_index.o -c cram/cram_index.c404gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -DKNETFILE_HOOKS -DUCSC_CRAM -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o cram/cram_io.o -c cram/cram_io.c405gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -DKNETFILE_HOOKS -DUCSC_CRAM -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o cram/cram_samtools.o -c cram/cram_samtools.c406gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -DKNETFILE_HOOKS -DUCSC_CRAM -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o cram/cram_stats.o -c cram/cram_stats.c407gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -DKNETFILE_HOOKS -DUCSC_CRAM -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o cram/files.o -c cram/files.c408gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -DKNETFILE_HOOKS -DUCSC_CRAM -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o cram/mFILE.o -c cram/mFILE.c409gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -DKNETFILE_HOOKS -DUCSC_CRAM -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o cram/open_trace_file.o -c cram/open_trace_file.c410gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -DKNETFILE_HOOKS -DUCSC_CRAM -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o cram/pooled_alloc.o -c cram/pooled_alloc.c411gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -DKNETFILE_HOOKS -DUCSC_CRAM -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o cram/rANS_static.o -c cram/rANS_static.c412gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -DKNETFILE_HOOKS -DUCSC_CRAM -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o cram/sam_header.o -c cram/sam_header.c413gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -DKNETFILE_HOOKS -DUCSC_CRAM -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o cram/string_alloc.o -c cram/string_alloc.c414gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -DKNETFILE_HOOKS -DUCSC_CRAM -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o cram/thread_pool.o -c cram/thread_pool.c415gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -DKNETFILE_HOOKS -DUCSC_CRAM -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o cram/vlen.o -c cram/vlen.c416gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -DKNETFILE_HOOKS -DUCSC_CRAM -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -o cram/zfio.o -c cram/zfio.c417ar -rc libhts.a kfunc.o knetfile.o kstring.o bgzf.o faidx.o hfile.o hfile_net.o hts.o md5.o regidx.o sam.o synced_bcf_reader.o vcf_sweep.o tbx.o vcf.o vcfutils.o cram/cram_codecs.o cram/cram_decode.o cram/cram_encode.o cram/cram_external.o cram/cram_index.o cram/cram_io.o cram/cram_samtools.o cram/cram_stats.o cram/files.o cram/mFILE.o cram/open_trace_file.o cram/pooled_alloc.o cram/rANS_static.o cram/sam_header.o cram/string_alloc.o cram/thread_pool.o cram/vlen.o cram/zfio.o 418ranlib libhts.a419make[1]: Leaving directory '/build/source/src/htslib'420/nix/store/jcpsvcpcn6dh3b2nwdlyzlsw5slqp954-which-2.21/bin/which: no mysql_config in (/nix/store/f45dcbbi7azvspwyiav8n694650yrx5l-mariadb-connector-c-3.2.5/bin)421cd hg/lib && make422make[1]: Entering directory '/build/source/src/hg/lib'423gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o acemblyClass.o -c acemblyClass.c424gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o adjacency.o -c adjacency.c425gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o affyAllExonProbe.o -c affyAllExonProbe.c426gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o affyAtlas.o -c affyAtlas.c427gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o affy10KDetails.o -c affy10KDetails.c428gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o affy120KDetails.o -c affy120KDetails.c429gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o affyOffset.o -c affyOffset.c430gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o affyPairs.o -c affyPairs.c431gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o agp.o -c agp.c432gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o agpFrag.o -c agpFrag.c433gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o agpGap.o -c agpGap.c434gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include 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-I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o barChartData.o -c barChartData.c456gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o barChartSample.o -c barChartSample.c457gcc -O 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-I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o bdgpExprLink.o -c bdgpExprLink.c459gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o bdgpGeneInfo.o -c bdgpGeneInfo.c460gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o bed.o -c bed.c461gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o bed5FloatScore.o -c bed5FloatScore.c462gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o bed5Pval.o -c bed5Pval.c463gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o bed6FloatScore.o -c bed6FloatScore.c464gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o bed8Attrs.o -c bed8Attrs.c465gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o bed12Source.o -c bed12Source.c466gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o bed12wSeq.o -c bed12wSeq.c467gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o bedCart.o -c bedCart.c468gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o bgiGeneInfo.o -c bgiGeneInfo.c469gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o bgiGeneSnp.o -c bgiGeneSnp.c470gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o bgiSnp.o -c bgiSnp.c471gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o bigBedFind.o -c bigBedFind.c472gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o bigBedLabel.o -c bigBedLabel.c473gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o bigDbSnp.o -c bigDbSnp.c474gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o bigGenePred.o -c bigGenePred.c475gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o bigPsl.o -c bigPsl.c476gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o bigTransMap.o -c bigTransMap.c477gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o bioImage.o -c bioImage.c478gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o blastTab.o -c blastTab.c479gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o blastzNet.o -c blastzNet.c480gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o blatServers.o -c blatServers.c481gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o borf.o -c borf.c482gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o borkPseudoHom.o -c borkPseudoHom.c483gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o botDelay.o -c botDelay.c484gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o cart.o -c cart.c485gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o cartDb.o -c cartDb.c486gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o cartJson.o -c cartJson.c487gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o cartTrackDb.o -c cartTrackDb.c488gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o cdsEvidence.o -c cdsEvidence.c489gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o cdsOrtho.o -c cdsOrtho.c490gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o cdsPick.o -c cdsPick.c491gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o cdsSpec.o -c cdsSpec.c492gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o ccdsInfo.o -c ccdsInfo.c493gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o ccdsNotes.o -c ccdsNotes.c494gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o ccdsGeneMap.o -c ccdsGeneMap.c495gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o celeraCoverage.o -c celeraCoverage.c496gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o celeraDupPositive.o -c celeraDupPositive.c497gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o cgapSage/cgapSage.o -c cgapSage/cgapSage.c498gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o cgapSage/cgapSageLib.o -c cgapSage/cgapSageLib.c499gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o cgh.o -c cgh.c500gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o chainCart.o -c chainCart.c501gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o chainDb.o -c chainDb.c502gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o chainLink.o -c chainLink.c503gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o chainNet.o -c chainNet.c504gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o chainNetDbLoad.o -c chainNetDbLoad.c505gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o chicken13kInfo.o -c chicken13kInfo.c506gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o chromBins.o -c chromBins.c507gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o chromAlias.o -c chromAlias.c508gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o chr18deletions.o -c chr18deletions.c509gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o chromGraph.o -c chromGraph.c510gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o chromGraphFactory.o -c chromGraphFactory.c511gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o chromInfo.o -c chromInfo.c512gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o chromInserts.o -c chromInserts.c513gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o chromKeeper.o -c chromKeeper.c514gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o clonePos.o -c clonePos.c515gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o codeBlast.o -c codeBlast.c516gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o codeBlastScore.o -c codeBlastScore.c517gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o cogs.o -c cogs.c518gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o cogsxra.o -c cogsxra.c519gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o columnInfo.o -c columnInfo.c520gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o contigAcc.o -c contigAcc.c521gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o coordConv.o -c coordConv.c522gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o cnpIafrate.o -c cnpIafrate.c523gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o cnpIafrate2.o -c cnpIafrate2.c524gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o cnpLocke.o -c cnpLocke.c525gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o cnpRedon.o -c cnpRedon.c526gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o cnpSebat.o -c cnpSebat.c527gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o cnpSebat2.o -c cnpSebat2.c528gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o cnpSharp2.o -c cnpSharp2.c529gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o cnpSharpCutoff.o -c cnpSharpCutoff.c530gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o cnpSharpSample.o -c cnpSharpSample.c531gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o cnpSharp.o -c cnpSharp.c532gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o cpgIsland.o -c cpgIsland.c533gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o cpgIslandExt.o -c cpgIslandExt.c534gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o ctgPos.o -c ctgPos.c535gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o ctgPos2.o -c ctgPos2.c536gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o customComposite.o -c customComposite.c537gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o bedDetail.o -c bedDetail.c538gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o cgiApoptosis.o -c cgiApoptosis.c539gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o customAdjacency.o -c customAdjacency.c540gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o customFactory.o -c customFactory.c541customFactory.c: In function 'customFactoryParseOptionalDb':542customFactory.c:4328:37: warning: passing argument 1 to 'restrict'-qualified parameter aliases with argument 4 [-Wrestrict]543 4328 | int rc = pthread_create(&threads[pt], NULL, remoteParallelLoad, &threads[pt]);544 | ^~~~~~~~~~~~ ~~~~~~~~~~~~545gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o customPp.o -c customPp.c546gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o customTrack.o -c customTrack.c547gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o cutter.o -c cutter.c548gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o cv.o -c cv.c549gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o cytoBand.o -c cytoBand.c550gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o dbDb.o -c dbDb.c551gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o dbRIP.o -c dbRIP.c552gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o dbSnpDetails.o -c dbSnpDetails.c553gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o dbSnpRs.o -c dbSnpRs.c554gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o defaultDb.o -c defaultDb.c555gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o delConrad2.o -c delConrad2.c556gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o delHinds2.o -c delHinds2.c557gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o dgv.o -c dgv.c558gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o dgvPlus.o -c dgvPlus.c559gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o dless.o -c dless.c560gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o dnaMotifSql.o -c dnaMotifSql.c561gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o dnaMarkovSql.o -c dnaMarkovSql.c562gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o dnaProbe.o -c dnaProbe.c563gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 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-D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o dvXref2.o -c dvXref2.c566gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o easyGene.o -c easyGene.c567gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o ec.o -c ec.c568gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o ecCode.o -c ecCode.c569gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o ecAttribute.o -c ecAttribute.c570gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o ecAttributeCode.o -c ecAttributeCode.c571gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o encode/encodeErge.o -c encode/encodeErge.c572gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o encode/encodeErgeHssCellLines.o -c encode/encodeErgeHssCellLines.c573gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o encode/encodeHapMapAlleleFreq.o -c encode/encodeHapMapAlleleFreq.c574gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o encode/encodeIndels.o -c encode/encodeIndels.c575gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o encode/encodePeak.o -c encode/encodePeak.c576gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o encode/encodeRegionInfo.o -c encode/encodeRegionInfo.c577gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o encode/encodeRegionInfoCustom.o -c encode/encodeRegionInfoCustom.c578gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o encode/encodeRna.o -c encode/encodeRna.c579gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o encode/encodeStanfordPromoters.o -c encode/encodeStanfordPromoters.c580gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o encode/encodeStanfordPromotersAverage.o -c encode/encodeStanfordPromotersAverage.c581gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o encode/pairedTagAlign.o -c encode/pairedTagAlign.c582gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o encode/peptideMapping.o -c encode/peptideMapping.c583gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o encode/tagAlign.o -c encode/tagAlign.c584gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o encode/wgEncodeGencodeAttrs.o -c encode/wgEncodeGencodeAttrs.c585gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o encode/wgEncodeGencodeExonSupport.o -c encode/wgEncodeGencodeExonSupport.c586gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o encode/wgEncodeGencodeEntrezGene.o -c encode/wgEncodeGencodeEntrezGene.c587gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o encode/wgEncodeGencodeTag.o -c encode/wgEncodeGencodeTag.c588gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o encode/wgEncodeGencodeGeneSymbol.o -c encode/wgEncodeGencodeGeneSymbol.c589gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o encode/wgEncodeGencodePdb.o -c encode/wgEncodeGencodePdb.c590gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o encode/wgEncodeGencodePubMed.o -c encode/wgEncodeGencodePubMed.c591gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o encode/wgEncodeGencodeRefSeq.o -c encode/wgEncodeGencodeRefSeq.c592gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o encode/wgEncodeGencodeGeneSource.o -c encode/wgEncodeGencodeGeneSource.c593gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o encode/wgEncodeGencodeTranscriptSource.o -c encode/wgEncodeGencodeTranscriptSource.c594gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o encode/wgEncodeGencodeTranscriptSupport.o -c encode/wgEncodeGencodeTranscriptSupport.c595gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o encode/wgEncodeGencodeTranscriptionSupportLevel.o -c encode/wgEncodeGencodeTranscriptionSupportLevel.c596gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o encode/wgEncodeGencodeUniProt.o -c encode/wgEncodeGencodeUniProt.c597gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o encode/wgEncodeGencodePolyAFeature.o -c encode/wgEncodeGencodePolyAFeature.c598gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o encode/wgEncodeGencodeAnnotationRemark.o -c encode/wgEncodeGencodeAnnotationRemark.c599gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o encode/wgEncodeCell.o -c encode/wgEncodeCell.c600gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o encode/encodeExp.o -c encode/encodeExp.c601gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o encode3/encode2Manifest.o -c encode3/encode2Manifest.c602gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o encode3/encode3Valid.o -c encode3/encode3Valid.c603gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include 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-I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o ensXRefZfish.o -c ensXRefZfish.c607gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o est3.o -c est3.c608gcc -O -g -fPIC -Wall -Wformat -Wimplicit 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-I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o estPair.o -c estPair.c610gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o exoFish.o -c exoFish.c611gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type 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-I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o factorSource.o -c factorSource.c616gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o fbTables.o -c fbTables.c617gcc -O -g -fPIC -Wall -Wformat -Wimplicit 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-I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o fileUi.o -c fileUi.c619gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o findKGAlias.o -c findKGAlias.c620gcc -O -g -fPIC -Wall -Wformat -Wimplicit 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-I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o genMapDb.o -c genMapDb.c637gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o geneBands.o -c geneBands.c638gcc -O -g -fPIC -Wall 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-I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o geneCheckDetails.o -c geneCheckDetails.c640gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o geneCheckWidget.o -c geneCheckWidget.c641gcc -O -g 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-I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o genePred.o -c genePred.c643gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o genePredReader.o -c genePredReader.c644gcc -O -g 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-I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o genoLay.o -c genoLay.c646gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o genomeRangeTreeFile.o -c 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-I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o genomicSuperDups.o -c genomicSuperDups.c649gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o geoMirror.o -c geoMirror.c650gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o ggCluster.o -c ggCluster.c651gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o ggDbIo.o -c ggDbIo.c652gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o ggDump.o -c ggDump.c653gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o ggGraph.o -c ggGraph.c654gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o ggMrnaAli.o -c ggMrnaAli.c655gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o ggTypes.o -c ggTypes.c656gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o glDbRep.o -c glDbRep.c657gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o goa.o -c goa.c658gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o goaPart.o -c goaPart.c659gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o googleAnalytics.o -c googleAnalytics.c660gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o gpFx.o -c gpFx.c661gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o growthCondition.o -c growthCondition.c662gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o grp.o -c grp.c663gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o gtexAse.o -c gtexAse.c664gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o gtexBoxplot.o -c gtexBoxplot.c665gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o gtexEqtlCluster.o -c gtexEqtlCluster.c666gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o gtexInfo.o -c gtexInfo.c667gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o gtexDonor.o -c gtexDonor.c668gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o gtexGeneBed.o -c gtexGeneBed.c669gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o gtexSample.o -c gtexSample.c670gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o gtexSampleData.o -c gtexSampleData.c671gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o gtexTissue.o -c gtexTissue.c672gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o gtexTissueData.o -c gtexTissueData.c673gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o gtexTissueMedian.o -c gtexTissueMedian.c674gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o gtexUi.o -c gtexUi.c675gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o gwasCatalog.o -c gwasCatalog.c676gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o hAnno.o -c hAnno.c677gcc -O -g -fPIC -Wall -Wformat -Wimplicit 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-I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o hapmapAllelesOrtho.o -c hapmapAllelesOrtho.c679gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o hapmapAllelesSummary.o -c hapmapAllelesSummary.c680gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o hapmapPhaseIIISummary.o -c hapmapPhaseIIISummary.c681gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o hapmapSnps.o -c hapmapSnps.c682gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o hapmapSnpsCombined.o -c 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-I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o hCommon.o -c hCommon.c685gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o hCytoBand.o -c 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-I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o hic.o -c hic.c697gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o hicUi.o -c hicUi.c698gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type 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-I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o hgRelate.o -c hgRelate.c700gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o hgSeq.o -c hgSeq.c701hgSeq.c: In function 'hgSeqOptions':702hgSeq.c:246:5: warning: 'hParseTableName' accessing 255 bytes in a region of size 32 [-Wstringop-overflow=]703 246 | hParseTableName(db, table, rootName, chrom);704 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~705hgSeq.c:246:5: note: referencing argument 4 of type 'char *'706In file included from hgSeq.c:10:707../inc/hdb.h:231:6: note: in a call to function 'hParseTableName'708 231 | void hParseTableName(char *db, char *table, char trackName[HDB_MAX_TABLE_STRING],709 | ^~~~~~~~~~~~~~~710hgSeq.c: In function 'hgSeqItemsInRange':711hgSeq.c:800:1: warning: 'hParseTableName' accessing 255 bytes in a region of size 32 [-Wstringop-overflow=]712 800 | hParseTableName(db, table, rootName, parsedChrom);713 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~714hgSeq.c:800:1: note: referencing argument 4 of type 'char *'715In file included from hgSeq.c:10:716../inc/hdb.h:231:6: note: in a call to function 'hParseTableName'717 231 | void hParseTableName(char *db, char *table, char trackName[HDB_MAX_TABLE_STRING],718 | ^~~~~~~~~~~~~~~719gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o hgdpGeo.o -c hgdpGeo.c720gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o hPrint.o -c hPrint.c721gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o hVarSubst.o -c hVarSubst.c722gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o hvGfx.o -c hvGfx.c723gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o HInv.o -c HInv.c724gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o hubConnect.o -c hubConnect.c725gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o hubSearchText.o -c hubSearchText.c726gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o hui.o -c hui.c727gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o humanParalog.o -c humanParalog.c728gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o hubPublic.o -c hubPublic.c729gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o imageClone.o -c imageClone.c730gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o indelShift.o -c indelShift.c731gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o interact.o -c interact.c732gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o interactUi.o -c interactUi.c733gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o isochores.o -c isochores.c734gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o ispyTables.o -c ispyTables.c735gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o itemAttr.o -c itemAttr.c736gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o itemConf.o -c itemConf.c737gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o itemDetailsHtml.o -c itemDetailsHtml.c738gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o jalview.o -c jalview.c739gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o jaxOrtholog.o -c jaxOrtholog.c740gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o jaxQTL.o -c jaxQTL.c741gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o jaxQTL3.o -c jaxQTL3.c742gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o jksql.o -c jksql.c743gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o joiner.o -c joiner.c744gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o jsHelper.o -c jsHelper.c745gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o kg1ToKg2.o -c kg1ToKg2.c746gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o jgiGene.o -c jgiGene.c747gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o joinMixer.o -c joinMixer.c748gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o kgAlias.o -c kgAlias.c749gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o kgColor.o -c kgColor.c750gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o kgProtAlias.o -c kgProtAlias.c751gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o kgXref.o -c kgXref.c752gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o knownInfo.o -c knownInfo.c753gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o knownMore.o -c knownMore.c754gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o knownToSuper.o -c knownToSuper.c755gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o lav.o -c lav.c756gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o ld.o -c ld.c757gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o ld2.o -c ld2.c758gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o lfs.o -c lfs.c759gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o liftOver.o -c liftOver.c760gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o liftOverChain.o -c liftOverChain.c761gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o liftUp.o -c liftUp.c762gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o llaInfo.o -c llaInfo.c763gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o longRange.o -c longRange.c764gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o lrg.o -c lrg.c765gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o lsSnpPdb.o -c lsSnpPdb.c766gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o lsSnpPdbChimera.o -c lsSnpPdbChimera.c767gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o mafFrames.o -c mafFrames.c768gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o mafGene.o -c mafGene.c769gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o mafSummary.o -c mafSummary.c770gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o makeItemsItem.o -c makeItemsItem.c771gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o mammalPsg.o -c mammalPsg.c772gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o mapSts.o -c mapSts.c773gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o mathWig.o -c mathWig.c774gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o mcnBreakpoints.o -c mcnBreakpoints.c775gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o mdb.o -c mdb.c776gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o metaChromGraph.o -c metaChromGraph.c777gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o microarray.o -c microarray.c778gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o minChromSize.o -c minChromSize.c779gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o minGeneInfo.o -c minGeneInfo.c780gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o mrnaMisMatch.o -c mrnaMisMatch.c781gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o mouseOrtho.o -c mouseOrtho.c782gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o mouseSyn.o -c mouseSyn.c783gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o mouseSynWhd.o -c mouseSynWhd.c784gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o mysqlTableStatus.o -c mysqlTableStatus.c785gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o ncbiRefLink.o -c ncbiRefLink.c786gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o ncbiRefSeqLink.o -c ncbiRefSeqLink.c787gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o netAlign.o -c netAlign.c788gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o netCart.o -c netCart.c789gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o nonCodingUi.o -c nonCodingUi.c790gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o omimTitle.o -c omimTitle.c791gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o ooUtils.o -c ooUtils.c792gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o orthoAlleles.o -c orthoAlleles.c793gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o pal.o -c pal.c794gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o pbStamp.o -c pbStamp.c795gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o pcrResult.o -c pcrResult.c796gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o pepPred.o -c pepPred.c797gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o peptideAtlasPeptide.o -c peptideAtlasPeptide.c798gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o plasEndPairs.o -c plasEndPairs.c799gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o polyGenotype.o -c polyGenotype.c800gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o protFeat.o -c protFeat.c801gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o pscreen.o -c pscreen.c802gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o pseudoGeneLink.o -c pseudoGeneLink.c803gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o pslReader.o -c pslReader.c804gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o pslWScore.o -c pslWScore.c805gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o putaInfo.o -c putaInfo.c806gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o qaSeq.o -c qaSeq.c807qaSeq.c: In function 'upOneDirFromFile':808qaSeq.c:500:1: warning: 'splitPath' accessing 512 bytes in a region of size 256 [-Wstringop-overflow=]809 500 | splitPath(path, dir, name, ext);810 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~811qaSeq.c:500:1: note: referencing argument 2 of type 'char *'812In file included from qaSeq.c:7:813../../inc/common.h:1110:6: note: in a call to function 'splitPath'814 1110 | void splitPath(char *path, char dir[PATH_LEN], char name[FILENAME_LEN],815 | ^~~~~~~~~816gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o rangeTreeFile.o -c rangeTreeFile.c817gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o rankProp.o -c rankProp.c818gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o recombRate.o -c recombRate.c819gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o recombRateRat.o -c recombRateRat.c820gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o recombRateMouse.o -c recombRateMouse.c821gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o refLink.o -c refLink.c822gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o refSeqStatus.o -c refSeqStatus.c823gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o rgdQtl.o -c rgdQtl.c824gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o riken.o -c riken.c825gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o rhMapZfishInfo.o -c rhMapZfishInfo.c826gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o rikenBest.o -c rikenBest.c827gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o rikenCluster.o -c rikenCluster.c828gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o rmskOut.o -c rmskOut.c829gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o rmskAlign.o -c rmskAlign.c830gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o rmskJoined.o -c rmskJoined.c831gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o rmskOut2.o -c rmskOut2.c832gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o rnaFold.o -c rnaFold.c833gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o rnaGene.o -c rnaGene.c834gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o rnaGroup.o -c rnaGroup.c835gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o rnaHybridization.o -c rnaHybridization.c836gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o rnaPLFold.o -c rnaPLFold.c837gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o tRNAs.o -c tRNAs.c838gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o gbRNAs.o -c gbRNAs.c839gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o snoRNAs.o -c snoRNAs.c840gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o lowelabPfamHit.o -c lowelabPfamHit.c841gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o lowelabArkinOperonScore.o -c lowelabArkinOperonScore.c842gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o lowelabTIGROperonScore.o -c lowelabTIGROperonScore.c843gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o rnaSecStr.o -c rnaSecStr.c844gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o tfbsConsFactors.o -c tfbsConsFactors.c845gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o roughAli.o -c roughAli.c846gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o transMapStuff.o -c transMapStuff.c847gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o transMapInfo.o -c transMapInfo.c848gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o transMapGene.o -c transMapGene.c849gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o transMapSrc.o -c transMapSrc.c850gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o sage.o -c sage.c851gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o sageCounts.o -c sageCounts.c852gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o sageExp.o -c sageExp.c853gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o samAlignment.o -c samAlignment.c854gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o sample.o -c sample.c855gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o sanger22extra.o -c sanger22extra.c856gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o sangerGene.o -c sangerGene.c857gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o sangerGeneToWBGeneID.o -c sangerGeneToWBGeneID.c858gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o sargassoSeaXra.o -c sargassoSeaXra.c859gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o scopDes.o -c scopDes.c860gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o scoredRef.o -c scoredRef.c861gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o search.o -c search.c862gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o seqWindow.o -c seqWindow.c863gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o sessionThumbnail.o -c sessionThumbnail.c864gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o sgdAbundance.o -c sgdAbundance.c865gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o sgdClone.o -c sgdClone.c866gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o sgdDescription.o -c sgdDescription.c867gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o sgdOther.o -c sgdOther.c868gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o simpleNucDiff.o -c simpleNucDiff.c869gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o simpleRepeat.o -c simpleRepeat.c870gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o snakeUi.o -c snakeUi.c871gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o snp.o -c snp.c872gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o snp125.o -c snp125.c873gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o snp125CodingCoordless.o -c snp125CodingCoordless.c874gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o snp132Ext.o -c snp132Ext.c875gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o snpExceptions.o -c snpExceptions.c876gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o snpFasta.o -c snpFasta.c877gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o snpMap.o -c snpMap.c878gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o snpTmp.o -c snpTmp.c879gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o snpUi.o -c snpUi.c880gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o snp125Exceptions.o -c snp125Exceptions.c881gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o snp125Ui.o -c snp125Ui.c882gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o softPromoter.o -c softPromoter.c883gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o softberryHom.o -c softberryHom.c884gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o soTerm.o -c soTerm.c885gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o spDb.o -c spDb.c886gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o splignAlign.o -c splignAlign.c887gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o sqlSanity.o -c sqlSanity.c888gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o stanMad.o -c stanMad.c889gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o stsAlias.o -c stsAlias.c890gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o stsInfo.o -c stsInfo.c891gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o stsInfo2.o -c stsInfo2.c892gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o stsInfoMouse.o -c stsInfoMouse.c893gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o stsInfoMouseNew.o -c stsInfoMouseNew.c894gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o stsInfoRat.o -c stsInfoRat.c895gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o stsMap.o -c stsMap.c896gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o stsMapMouse.o -c stsMapMouse.c897gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o stsMapMouseNew.o -c stsMapMouseNew.c898gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o stsMapRat.o -c stsMapRat.c899gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o stsMarker.o -c stsMarker.c900gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o suggest.o -c suggest.c901gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o switchDbTss.o -c switchDbTss.c902gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o synMap.o -c synMap.c903gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o synteny100000.o -c synteny100000.c904gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o syntenyBerk.o -c syntenyBerk.c905gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o syntenySanger.o -c syntenySanger.c906gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o sqlProg.o -c sqlProg.c907gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o tfbsCons.o -c tfbsCons.c908gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o tfbsConsSites.o -c tfbsConsSites.c909gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o tablesTables.o -c tablesTables.c910gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o tableDescriptions.o -c tableDescriptions.c911gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o tableStatus.o -c tableStatus.c912gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o targetDb.o -c targetDb.c913gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o tfbsConsMap.o -c tfbsConsMap.c914gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o tagRepo.o -c tagRepo.c915gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o taxonDivision.o -c taxonDivision.c916gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o taxonGeneticCode.o -c taxonGeneticCode.c917gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o taxonName.o -c taxonName.c918gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o taxonNode.o -c taxonNode.c919gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o taxonXref.o -c taxonXref.c920gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o tigrCmrGene.o -c tigrCmrGene.c921gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o tigrOperon.o -c tigrOperon.c922gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o tilingPath.o -c tilingPath.c923gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o traceInfo.o -c traceInfo.c924gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o trackDb.o -c trackDb.c925gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o trackDbCustom.o -c trackDbCustom.c926trackDbCustom.c: In function 'trackDbInclude':927trackDbCustom.c:292:5: warning: 'splitPath' accessing 512 bytes in a region of size 256 [-Wstringop-overflow=]928 292 | splitPath(raFile, incFile, NULL, NULL);929 | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~930trackDbCustom.c:292:5: note: referencing argument 2 of type 'char *'931In file included from trackDbCustom.c:9:932../../inc/common.h:1110:6: note: in a call to function 'splitPath'933 1110 | void splitPath(char *path, char dir[PATH_LEN], char name[FILENAME_LEN],934 | ^~~~~~~~~935gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o trackDbCache.o -c trackDbCache.c936trackDbCache.c: In function 'cloneTdbListToSharedMem':937trackDbCache.c:310:1: warning: ignoring return value of 'ftruncate' declared with attribute 'warn_unused_result' [-Wunused-result]938 310 | ftruncate(fd, 0);939 | ^~~~~~~~~~~~~~~~940trackDbCache.c:311:1: warning: ignoring return value of 'ftruncate' declared with attribute 'warn_unused_result' [-Wunused-result]941 311 | ftruncate(fd, size);942 | ^~~~~~~~~~~~~~~~~~~943trackDbCache.c:351:1: warning: ignoring return value of 'ftruncate' declared with attribute 'warn_unused_result' [-Wunused-result]944 351 | ftruncate(fd, memUsed);945 | ^~~~~~~~~~~~~~~~~~~~~~946gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o trackHub.o -c trackHub.c947gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o trackLayout.o -c trackLayout.c948gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o trackTable.o -c trackTable.c949gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o trackVersion.o -c trackVersion.c950gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o trashDir.o -c trashDir.c951gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o transRegCode.o -c transRegCode.c952gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o transRegCodeCondition.o -c transRegCodeCondition.c953gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o transRegCodeProbe.o -c transRegCodeProbe.c954gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o txAliDiff.o -c txAliDiff.c955gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o txCluster.o -c txCluster.c956gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o txCommon.o -c txCommon.c957gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o txEdgeBed.o -c txEdgeBed.c958gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o txEdgeOrtho.o -c txEdgeOrtho.c959gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o txGraph.o -c txGraph.c960gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o txInfo.o -c txInfo.c961gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o txRnaAccs.o -c txRnaAccs.c962gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o ucscRetroInfo.o -c ucscRetroInfo.c963gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o ucscRetroOrtho.o -c ucscRetroOrtho.c964gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o variant.o -c variant.c965gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o variantProjector.o -c variantProjector.c966gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o vcfUi.o -c vcfUi.c967gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o vegaInfo.o -c vegaInfo.c968gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o vegaInfoZfish.o -c vegaInfoZfish.c969gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o visiGene.o -c visiGene.c970gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o vntr.o -c vntr.c971gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o wabAli.o -c wabAli.c972sed -e 's/\\/\\\\/g; s/"/\\"/g; s/^/"/; s/$/\\n"/;' jWestHeader.html > jWestHeader.h973sed -e 's/\\/\\\\/g; s/"/\\"/g; s/^/"/; s/$/\\n"/;' jWestBanner.html > jWestBanner.h974gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o web.o -c web.c975gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o ncRna.o -c ncRna.c976gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o wgRna.o -c wgRna.c977gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o wigAsciiToBinary.o -c wigAsciiToBinary.c978gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o wigDataStream.o -c wigDataStream.c979gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o wiggle.o -c wiggle.c980gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o wiggleCart.o -c wiggleCart.c981gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o wiggleUtils.o -c wiggleUtils.c982gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o wikiLink.o -c wikiLink.c983gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o wikiTrack.o -c wikiTrack.c984gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o yaleGencodeAssoc.o -c yaleGencodeAssoc.c985gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o zdobnovSynt.o -c zdobnovSynt.c986gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o oreganno.o -c oreganno.c987gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o oregannoUi.o -c oregannoUi.c988gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o gvUi.o -c gvUi.c989gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o gv.o -c gv.c990gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o omicia.o -c omicia.c991gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o protVar.o -c protVar.c992gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o pgSnp.o -c pgSnp.c993gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o alignInfo.o -c alignInfo.c994gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o cddInfo.o -c cddInfo.c995gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o loweutils.o -c loweutils.c996gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o cddDesc.o -c cddDesc.c997gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o arCOGs.o -c arCOGs.c998gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o arcogdesc.o -c arcogdesc.c999gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o geneTree.o -c geneTree.c1000gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o megablastInfo.o -c megablastInfo.c1001gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o pgPhenoAssoc.o -c pgPhenoAssoc.c1002gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o pgSiftPred.o -c pgSiftPred.c1003gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o pgPolyphenPred.o -c pgPolyphenPred.c1004gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o userRegions.o -c userRegions.c1005gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o variome.o -c variome.c1006gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o gencodeAnnotationRemark.o -c gencodeAnnotationRemark.c1007gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o gencodeAttrs.o -c gencodeAttrs.c1008gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o gencodeToEntrezGene.o -c gencodeToEntrezGene.c1009gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o gencodeExonSupport.o -c gencodeExonSupport.c1010gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o gencodeGeneSource.o -c gencodeGeneSource.c1011gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o gencodeToGeneSymbol.o -c gencodeToGeneSymbol.c1012gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o gencodeToPdb.o -c gencodeToPdb.c1013gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o gencodeToPubMed.o -c gencodeToPubMed.c1014gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o gencodeToRefSeq.o -c gencodeToRefSeq.c1015gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o gencodeTag.o -c gencodeTag.c1016gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o gencodeTranscriptionSupportLevel.o -c gencodeTranscriptionSupportLevel.c1017gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o gencodeTranscriptSource.o -c gencodeTranscriptSource.c1018gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o gencodeTranscriptSupport.o -c gencodeTranscriptSupport.c1019gcc -O -g -fPIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DUSE_HIC -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -I../../htslib -I/include -I/nix/store/yc42mb1qgf4b9p66mgs3smnw59wq29k4-libpng-apng-1.6.37-dev/include/libpng16 -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include -I/nix/store/xlc0xvxfa1qhs6qzvvdmlgpkn2psazjq-mariadb-connector-c-3.2.5-dev/include/mysql -o gencodeToUniProt.o -c gencodeToUniProt.c1020cd straw && make straw.o1021make[2]: Entering directory '/build/source/src/hg/lib/straw'1022g++ straw.cpp -g -c -lz -std=c++11 -lcurl -o ../straw.o1023make[2]: Leaving directory '/build/source/src/hg/lib/straw'1024ar rcus ../../lib/i686/jkhgap.a acemblyClass.o adjacency.o affyAllExonProbe.o affyAtlas.o affy10KDetails.o affy120KDetails.o affyOffset.o affyPairs.o agp.o agpFrag.o agpGap.o alignSeqSizes.o altGraph.o altGraphX.o ancientRref.o annoFormatVep.o annoGratorGpVar.o annoGrateWigDb.o annoStreamDb.o annoStreamDbFactorSource.o annoStreamDbPslPlus.o annoStreamWig.o api.o atomDb.o autoUpgrade.o axtInfo.o axtLib.o bactigPos.o hgBam.o barChartBed.o barChartCategory.o barChartUi.o barChartData.o barChartSample.o baseMaskCommon.o bdgpExprLink.o bdgpGeneInfo.o bed.o bed5FloatScore.o bed5Pval.o bed6FloatScore.o bed8Attrs.o bed12Source.o bed12wSeq.o bedCart.o bgiGeneInfo.o bgiGeneSnp.o bgiSnp.o bigBedFind.o bigBedLabel.o bigDbSnp.o bigGenePred.o bigPsl.o bigTransMap.o bioImage.o blastTab.o blastzNet.o blatServers.o borf.o borkPseudoHom.o botDelay.o cart.o cartDb.o cartJson.o cartTrackDb.o cdsEvidence.o cdsOrtho.o cdsPick.o cdsSpec.o ccdsInfo.o ccdsNotes.o ccdsGeneMap.o celeraCoverage.o celeraDupPositive.o cgapSage/cgapSage.o cgapSage/cgapSageLib.o cgh.o chainCart.o chainDb.o chainLink.o chainNet.o chainNetDbLoad.o chicken13kInfo.o chromBins.o chromAlias.o chr18deletions.o chromGraph.o chromGraphFactory.o chromInfo.o chromInserts.o chromKeeper.o clonePos.o codeBlast.o codeBlastScore.o cogs.o cogsxra.o columnInfo.o contigAcc.o coordConv.o cnpIafrate.o cnpIafrate2.o cnpLocke.o cnpRedon.o cnpSebat.o cnpSebat2.o cnpSharp2.o cnpSharpCutoff.o cnpSharpSample.o cnpSharp.o cpgIsland.o cpgIslandExt.o ctgPos.o ctgPos2.o customComposite.o bedDetail.o cgiApoptosis.o customAdjacency.o customFactory.o customPp.o customTrack.o cutter.o cv.o cytoBand.o dbDb.o dbRIP.o dbSnpDetails.o dbSnpRs.o defaultDb.o delConrad2.o delHinds2.o dgv.o dgvPlus.o dless.o dnaMotifSql.o dnaMarkovSql.o dnaProbe.o dv.o dvBed.o dvXref2.o easyGene.o ec.o ecCode.o ecAttribute.o ecAttributeCode.o encode/encodeErge.o encode/encodeErgeHssCellLines.o encode/encodeHapMapAlleleFreq.o encode/encodeIndels.o encode/encodePeak.o encode/encodeRegionInfo.o encode/encodeRegionInfoCustom.o encode/encodeRna.o encode/encodeStanfordPromoters.o encode/encodeStanfordPromotersAverage.o encode/pairedTagAlign.o encode/peptideMapping.o encode/tagAlign.o encode/wgEncodeGencodeAttrs.o encode/wgEncodeGencodeExonSupport.o encode/wgEncodeGencodeEntrezGene.o encode/wgEncodeGencodeTag.o encode/wgEncodeGencodeGeneSymbol.o encode/wgEncodeGencodePdb.o encode/wgEncodeGencodePubMed.o encode/wgEncodeGencodeRefSeq.o encode/wgEncodeGencodeGeneSource.o encode/wgEncodeGencodeTranscriptSource.o encode/wgEncodeGencodeTranscriptSupport.o encode/wgEncodeGencodeTranscriptionSupportLevel.o encode/wgEncodeGencodeUniProt.o encode/wgEncodeGencodePolyAFeature.o encode/wgEncodeGencodeAnnotationRemark.o encode/wgEncodeCell.o encode/encodeExp.o encode3/encode2Manifest.o encode3/encode3Valid.o ensFace.o ensInfo.o ensPhusionBlast.o ensXRefZfish.o est3.o estOrientInfo.o estPair.o exoFish.o expData.o expRecord.o exprBed.o facetField.o factorSource.o fbTables.o featureBits.o fileUi.o findKGAlias.o findKGProtAlias.o fishClones.o flyBase2004Xref.o flyBaseSwissProt.o flyreg.o flyreg2.o gbExtFile.o gbWarn.o gbMiscDiff.o gbProtAnn.o gcPercent.o gbSeq.o genbank.o genbankBlackList.o gencodeGeneClass.o gencodeIntron.o genMapDb.o geneBands.o geneCheck.o geneCheckDetails.o geneCheckWidget.o geneGraph.o genePred.o genePredReader.o geneSimilarities.o genoLay.o genomeRangeTreeFile.o genomicDups.o genomicSuperDups.o geoMirror.o ggCluster.o ggDbIo.o ggDump.o ggGraph.o ggMrnaAli.o ggTypes.o glDbRep.o goa.o goaPart.o googleAnalytics.o gpFx.o growthCondition.o grp.o gtexAse.o gtexBoxplot.o gtexEqtlCluster.o gtexInfo.o gtexDonor.o gtexGeneBed.o gtexSample.o gtexSampleData.o gtexTissue.o gtexTissueData.o gtexTissueMedian.o gtexUi.o gwasCatalog.o hAnno.o haplotypes.o hapmapAllelesOrtho.o hapmapAllelesSummary.o hapmapPhaseIIISummary.o hapmapSnps.o hapmapSnpsCombined.o hashJoin.o hCommon.o hCytoBand.o hdb.o hgColors.o hgConfig.o hgExp.o hgFind.o hgFindSpec.o hgFindSpecCustom.o hgHgvs.o hgHgvsParse.o hgGene.o hic.o hicUi.o hgMaf.o hgRelate.o hgSeq.o hgdpGeo.o hPrint.o hVarSubst.o hvGfx.o HInv.o hubConnect.o hubSearchText.o hui.o humanParalog.o hubPublic.o imageClone.o indelShift.o interact.o interactUi.o isochores.o ispyTables.o itemAttr.o itemConf.o itemDetailsHtml.o jalview.o jaxOrtholog.o jaxQTL.o jaxQTL3.o jksql.o joiner.o jsHelper.o kg1ToKg2.o jgiGene.o joinMixer.o kgAlias.o kgColor.o kgProtAlias.o kgXref.o knownInfo.o knownMore.o knownToSuper.o lav.o ld.o ld2.o lfs.o liftOver.o liftOverChain.o liftUp.o llaInfo.o longRange.o lrg.o lsSnpPdb.o lsSnpPdbChimera.o mafFrames.o mafGene.o mafSummary.o makeItemsItem.o mammalPsg.o mapSts.o mathWig.o mcnBreakpoints.o mdb.o metaChromGraph.o microarray.o minChromSize.o minGeneInfo.o mrnaMisMatch.o mouseOrtho.o mouseSyn.o mouseSynWhd.o mysqlTableStatus.o ncbiRefLink.o ncbiRefSeqLink.o netAlign.o netCart.o nonCodingUi.o omimTitle.o ooUtils.o orthoAlleles.o pal.o pbStamp.o pcrResult.o pepPred.o peptideAtlasPeptide.o plasEndPairs.o polyGenotype.o protFeat.o pscreen.o pseudoGeneLink.o pslReader.o pslWScore.o putaInfo.o qaSeq.o rangeTreeFile.o rankProp.o recombRate.o recombRateRat.o recombRateMouse.o refLink.o refSeqStatus.o rgdQtl.o riken.o rhMapZfishInfo.o rikenBest.o rikenCluster.o rmskOut.o rmskAlign.o rmskJoined.o rmskOut2.o rnaFold.o rnaGene.o rnaGroup.o rnaHybridization.o rnaPLFold.o tRNAs.o gbRNAs.o snoRNAs.o lowelabPfamHit.o lowelabArkinOperonScore.o lowelabTIGROperonScore.o rnaSecStr.o tfbsConsFactors.o roughAli.o transMapStuff.o transMapInfo.o transMapGene.o transMapSrc.o sage.o sageCounts.o sageExp.o samAlignment.o sample.o sanger22extra.o sangerGene.o sangerGeneToWBGeneID.o sargassoSeaXra.o scopDes.o scoredRef.o search.o seqWindow.o sessionThumbnail.o sgdAbundance.o sgdClone.o sgdDescription.o sgdOther.o simpleNucDiff.o simpleRepeat.o snakeUi.o snp.o snp125.o snp125CodingCoordless.o snp132Ext.o snpExceptions.o snpFasta.o snpMap.o snpTmp.o snpUi.o snp125Exceptions.o snp125Ui.o softPromoter.o softberryHom.o soTerm.o spDb.o splignAlign.o sqlSanity.o stanMad.o stsAlias.o stsInfo.o stsInfo2.o stsInfoMouse.o stsInfoMouseNew.o stsInfoRat.o stsMap.o stsMapMouse.o stsMapMouseNew.o stsMapRat.o stsMarker.o suggest.o switchDbTss.o synMap.o synteny100000.o syntenyBerk.o syntenySanger.o sqlProg.o tfbsCons.o tfbsConsSites.o tablesTables.o tableDescriptions.o tableStatus.o targetDb.o tfbsConsMap.o tagRepo.o taxonDivision.o taxonGeneticCode.o taxonName.o taxonNode.o taxonXref.o tigrCmrGene.o tigrOperon.o tilingPath.o traceInfo.o trackDb.o trackDbCustom.o trackDbCache.o trackHub.o trackLayout.o trackTable.o trackVersion.o trashDir.o transRegCode.o transRegCodeCondition.o transRegCodeProbe.o txAliDiff.o txCluster.o txCommon.o txEdgeBed.o txEdgeOrtho.o txGraph.o txInfo.o txRnaAccs.o ucscRetroInfo.o ucscRetroOrtho.o variant.o variantProjector.o vcfUi.o vegaInfo.o vegaInfoZfish.o visiGene.o vntr.o wabAli.o web.o ncRna.o wgRna.o wigAsciiToBinary.o wigDataStream.o wiggle.o wiggleCart.o wiggleUtils.o wikiLink.o wikiTrack.o yaleGencodeAssoc.o zdobnovSynt.o oreganno.o oregannoUi.o gvUi.o gv.o omicia.o protVar.o pgSnp.o alignInfo.o cddInfo.o loweutils.o cddDesc.o arCOGs.o arcogdesc.o geneTree.o megablastInfo.o pgPhenoAssoc.o pgSiftPred.o pgPolyphenPred.o userRegions.o variome.o gencodeAnnotationRemark.o gencodeAttrs.o gencodeToEntrezGene.o gencodeExonSupport.o gencodeGeneSource.o gencodeToGeneSymbol.o gencodeToPdb.o gencodeToPubMed.o gencodeToRefSeq.o gencodeTag.o gencodeTranscriptionSupportLevel.o gencodeTranscriptSource.o gencodeTranscriptSupport.o gencodeToUniProt.o straw.o1025ar: `u' modifier ignored since `D' is the default (see `U')1026make[1]: Leaving directory '/build/source/src/hg/lib'1027cd optimalLeaf && make1028make[1]: Entering directory '/build/source/src/optimalLeaf'1029g++ -c -g Tree.cc1030g++ -c -g Leaf.cc1031g++ -c -g readFile.cc1032g++ -c -g SimMat.cc1033g++ -c -g bestArr.cc1034mkdir i6861035ar rcus ../lib/i686/optimalLeaf.a Tree.o Leaf.o readFile.o SimMat.o bestArr.o 1036ar: `u' modifier ignored since `D' is the default (see `U')1037make[1]: Leaving directory '/build/source/src/optimalLeaf'1038ar rcus ../lib/i686/jkOwnLib.a bandExt.o crudeali.o ffAliHelp.o ffSeedExtend.o fuzzyFind.o genoFind.o gfBlatLib.o gfClientLib.o gfInternal.o gfOut.o gfPcrLib.o gfWebLib.o ooc.o patSpace.o splix.o supStitch.o trans3.o xenbig.o xensmall.o 1039ar: `u' modifier ignored since `D' is the default (see `U')1040cp: cannot stat '../lib/x86_64/jkOwnLib.a': No such file or directory

failed kent-404 checks.i686-linux.kent · build #2 · raw

failed `kent-404` `checks.i686-linux.kent` · build #2 · raw