elastic-arm-c7c4897b: building dkrkaq48gwwkx19ajbmv9a8rx0x9w27q-meme-suite-5.1.1.drv Running phase: unpackPhase unpacking sources unpacking source archive /nix/store/8q9parp8919y1nyzgw4zbvhdc56cbir6-meme-5.1.1.tar.gz source root is meme-5.1.1 setting SOURCE_DATE_EPOCH to timestamp 1580598504 of file meme-5.1.1/doc/release-notes.html Running phase: patchPhase patching sources Running phase: updateAutotoolsGnuConfigScriptsPhase updateAutotoolsGnuConfigScriptsPhase Updating Autotools / GNU config script to a newer upstream version: ./config/config.sub Updating Autotools / GNU config script to a newer upstream version: ./config/config.guess Running phase: configurePhase configuring fixing libtool script ./config/ltmain.sh fixing libtool script ./src/libxml2/ltmain.sh ./configure configure flags: --disable-static --disable-dependency-tracking --prefix=/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1 checking for a BSD-compatible install... /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/mkdir -p checking for gawk... gawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether make supports nested variables... 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(cached) pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse nm output from gcc object... ok checking for sysroot... no checking for a working dd... /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/dd checking how to truncate binary pipes... /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... no checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking whether make sets $(MAKE)... (cached) yes checking for ld... /nix/store/jm6gqq369d0vd9pz3b7swn2vyycygdb9-gcc-wrapper-9.5.0/bin/ld checking for sed... 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Png images won''t be generated from encapsulated postscript. configure: WARNING: Checking Required Perl Modules: File::Which missing. HTML::PullParser missing. HTML::Template missing. HTML::TreeBuilder missing. JSON missing. XML::Simple missing. On Ubuntu, you may need to first run 'sudo apt-get install libexpat-dev' XML::Parser::Expat missing. Checking Optional Modules: Log::Log4perl missing. Used for logging and debugging by developers. Math::CDF missing. Only required for fasta-enriched-center script (which is not called by the web scripts). XML::Compile::SOAP11 missing. Used for downloading sequence databases from RSAT. On Ubuntu, you may first need to run 'sudo apt-get install libxml2-dev' XML::Compile::WSDL11 missing. Used for downloading sequence databases from RSAT XML::Compile::Transport::SOAPHTTP missing. Used for downloading sequence databases from RSAT ======================== Configuration parameters ======================== Install path: /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1 Install UID: Version: 5.1.1 C compiler: gcc C compiler flags: -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 Linker: /nix/store/jm6gqq369d0vd9pz3b7swn2vyycygdb9-gcc-wrapper-9.5.0/bin/ld Special Libs: -lz -lm MPICC gcc MPIRUN MPI_CMD MPIINC MPILIBDIR MPIFLAGS SOURCE URL: WEBSITE URL: http://meme-suite.org ALTERNATE WEBSITE URL: PREVIOUS VERSION URL: SERVER CONTACT: DEVELOPER CONTACT: meme-suite@uw.edu GO-SERVER URL: http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO_TERM_ID XBUILD: PERL: /nix/store/qjkhzhzav2bkifw5kis91ckzv9sjjpj7-perl-5.36.0/bin/perl PYTHON: /nix/store/ar76b3831ydkmfhf0r9v3wbma5i61iz2-python3-3.10.9/bin/python PYTHON VERSiON: 3.1 CONVERT: GHOSTSCRIPT: BUILD LIBXML2: yes LIBXML2 compiler flags: -I${top_srcdir}/src/libxml2/include LIBXML2 libs: ${top_builddir}/src/libxml2/libxml2.la BUILD LIBXSLT: yes LIBXSLT compiler flags: -I${top_srcdir}/src/ LIBXSLT libs: ${top_builddir}/src/libxslt/libxslt.la MEME DB: ${datarootdir}/${PACKAGE_NAME}-5.1.1/db MEME LOGS: ${localstatedir}/${PACKAGE_NAME}-5.1.1/LOGS MEME TEMP FILES: OPAL URL: no OPAL DEPLOY DIRECTORY: Run the following commands to compile, test and install meme: make make test make install Then make sure that the following two directories are added to your PATH variable: /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1 This can often be done by editing the file named .profile to add the following line: export PATH=/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin:/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1:$PATH Running phase: buildPhase building build flags: SHELL=/nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash make all-recursive make[1]: Entering directory '/build/meme-5.1.1' Making all in src make[2]: Entering directory '/build/meme-5.1.1/src' echo '#define MEME_DIR "/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1"' >dir.h echo '#define DATA_DIR "/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1" ' >> dir.h echo '#define BIN_DIR "/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin" ' >> dir.h echo '#define LIBEXEC_DIR "/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1" ' >> dir.h echo '#define TEMP_DIR "" ' >> dir.h echo '#define REVISION "1ec0cac75da38ade3bb84e84d35520ca52977940"' > projrel.h echo '#define ARCHIVE_DATE "Wed Jan 29 15:00:42 2020 -0800"' >> projrel.h make all-recursive make[3]: Entering directory '/build/meme-5.1.1/src' Making all in filters make[4]: Entering directory '/build/meme-5.1.1/src/filters' Making all in purge make[5]: Entering directory '/build/meme-5.1.1/src/filters/purge' gcc -DHAVE_CONFIG_H -I. -I../../.. -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o afnio.o afnio.c gcc -DHAVE_CONFIG_H -I. -I../../.. -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o alphabet.o alphabet.c gcc -DHAVE_CONFIG_H -I. -I../../.. -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o block.o block.c gcc -DHAVE_CONFIG_H -I. -I../../.. -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o dheap.o dheap.c gcc -DHAVE_CONFIG_H -I. -I../../.. -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o gblast.o gblast.c gblast.c: In function 'MakeGBlast': gblast.c:110:2: warning: this 'for' clause does not guard... [-Wmisleading-indentation] 110 | for(c=0; c <= nAlpha(A); c++) free(best[c]); free(best); | ^~~ gblast.c:110:47: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for' 110 | for(c=0; c <= nAlpha(A); c++) free(best[c]); free(best); | ^~~~ gcc -DHAVE_CONFIG_H -I. -I../../.. -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o karlin.o karlin.c gcc -DHAVE_CONFIG_H -I. -I../../.. -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o mheap.o mheap.c gcc -DHAVE_CONFIG_H -I. -I../../.. -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o mlist.o mlist.c gcc -DHAVE_CONFIG_H -I. -I../../.. -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o pairaln.o pairaln.c gcc -DHAVE_CONFIG_H -I. -I../../.. -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o pmain.o pmain.c gcc -DHAVE_CONFIG_H -I. -I../../.. -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o purge.o purge.c gcc -DHAVE_CONFIG_H -I. -I../../.. -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o random.o random.c gcc -DHAVE_CONFIG_H -I. -I../../.. -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o seqset.o seqset.c gcc -DHAVE_CONFIG_H -I. -I../../.. -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o sequence.o sequence.c sequence.c: In function 'RandomizeSeq': sequence.c:235:2: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 235 | if(E->info!=NULL)free(E->info); E->info = NULL; return E; | ^~ sequence.c:235:34: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 235 | if(E->info!=NULL)free(E->info); E->info = NULL; return E; | ^ sequence.c: In function 'ShuffleSeq': sequence.c:290:2: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 290 | if(E->info!=NULL)free(E->info); E->info = NULL; | ^~ sequence.c:290:34: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 290 | if(E->info!=NULL)free(E->info); E->info = NULL; | ^ sequence.c: In function 'ShuffleSeq2': sequence.c:309:2: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 309 | if(E->info!=NULL)free(E->info); E->info = NULL; | ^~ sequence.c:309:34: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 309 | if(E->info!=NULL)free(E->info); E->info = NULL; | ^ /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../../../libtool --tag=CC --mode=link gcc -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -o purge afnio.o alphabet.o block.o dheap.o gblast.o karlin.o mheap.o mlist.o pairaln.o pmain.o purge.o random.o seqset.o sequence.o -lm -lz -lm libtool: link: gcc -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -o purge afnio.o alphabet.o block.o dheap.o gblast.o karlin.o mheap.o mlist.o pairaln.o pmain.o purge.o random.o seqset.o sequence.o -lz -lm make[5]: Leaving directory '/build/meme-5.1.1/src/filters/purge' Making all in dust make[5]: Entering directory '/build/meme-5.1.1/src/filters/dust' gcc -DHAVE_CONFIG_H -I. -I../../.. -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o tust.o tust.c gcc -DHAVE_CONFIG_H -I. -I../../.. -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o dust.o dust.c gcc -DHAVE_CONFIG_H -I. -I../../.. -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o getfa.o getfa.c /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../../../libtool --tag=CC --mode=link gcc -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -o dust tust.o dust.o getfa.o -lz -lm libtool: link: gcc -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -o dust tust.o dust.o getfa.o -lz -lm make[5]: Leaving directory '/build/meme-5.1.1/src/filters/dust' make[5]: Entering directory '/build/meme-5.1.1/src/filters' make[5]: Nothing to be done for 'all-am'. make[5]: Leaving directory '/build/meme-5.1.1/src/filters' make[4]: Leaving directory '/build/meme-5.1.1/src/filters' Making all in libxml2 make[4]: Entering directory '/build/meme-5.1.1/src/libxml2' Making all in include make[5]: Entering directory '/build/meme-5.1.1/src/libxml2/include' Making all in . make[6]: Entering directory '/build/meme-5.1.1/src/libxml2/include' make[6]: Nothing to be done for 'all-am'. make[6]: Leaving directory '/build/meme-5.1.1/src/libxml2/include' Making all in libxml make[6]: Entering directory '/build/meme-5.1.1/src/libxml2/include/libxml' make[6]: Nothing to be done for 'all'. make[6]: Leaving directory '/build/meme-5.1.1/src/libxml2/include/libxml' make[5]: Leaving directory '/build/meme-5.1.1/src/libxml2/include' Making all in . make[5]: Entering directory '/build/meme-5.1.1/src/libxml2' /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libxml2_la-chvalid.lo `test -f 'chvalid.c' || echo './'`chvalid.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c chvalid.c -fPIC -DPIC -o .libs/libxml2_la-chvalid.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libxml2_la-debugXML.lo `test -f 'debugXML.c' || echo './'`debugXML.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c debugXML.c -fPIC -DPIC -o .libs/libxml2_la-debugXML.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I. -I./include -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libxml2_la-dict.lo `test -f 'dict.c' || echo './'`dict.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I. 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/nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../../libtool --tag=CC --mode=link gcc -w -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -o libxml2.la libxml2_la-chvalid.lo libxml2_la-debugXML.lo libxml2_la-dict.lo libxml2_la-encoding.lo libxml2_la-entities.lo libxml2_la-error.lo libxml2_la-globals.lo libxml2_la-hash.lo libxml2_la-HTMLparser.lo libxml2_la-HTMLtree.lo libxml2_la-list.lo libxml2_la-parserInternals.lo libxml2_la-parser.lo libxml2_la-pattern.lo libxml2_la-relaxng.lo libxml2_la-tree.lo libxml2_la-SAX2.lo libxml2_la-threads.lo libxml2_la-uri.lo libxml2_la-valid.lo libxml2_la-xmlIO.lo libxml2_la-xmlreader.lo libxml2_la-xmlregexp.lo libxml2_la-xmlsave.lo libxml2_la-xmlstring.lo libxml2_la-xmlschemas.lo libxml2_la-xmlschemastypes.lo libxml2_la-xmlunicode.lo libxml2_la-xmlwriter.lo libxml2_la-xmlmemory.lo libxml2_la-xpath.lo -lz -lm libtool: link: ar cru .libs/libxml2.a .libs/libxml2_la-chvalid.o .libs/libxml2_la-debugXML.o .libs/libxml2_la-dict.o .libs/libxml2_la-encoding.o .libs/libxml2_la-entities.o .libs/libxml2_la-error.o .libs/libxml2_la-globals.o .libs/libxml2_la-hash.o .libs/libxml2_la-HTMLparser.o .libs/libxml2_la-HTMLtree.o .libs/libxml2_la-list.o .libs/libxml2_la-parserInternals.o .libs/libxml2_la-parser.o .libs/libxml2_la-pattern.o .libs/libxml2_la-relaxng.o .libs/libxml2_la-tree.o .libs/libxml2_la-SAX2.o .libs/libxml2_la-threads.o .libs/libxml2_la-uri.o .libs/libxml2_la-valid.o .libs/libxml2_la-xmlIO.o .libs/libxml2_la-xmlreader.o .libs/libxml2_la-xmlregexp.o .libs/libxml2_la-xmlsave.o .libs/libxml2_la-xmlstring.o .libs/libxml2_la-xmlschemas.o .libs/libxml2_la-xmlschemastypes.o .libs/libxml2_la-xmlunicode.o .libs/libxml2_la-xmlwriter.o .libs/libxml2_la-xmlmemory.o .libs/libxml2_la-xpath.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libxml2.a libtool: link: ( cd ".libs" && rm -f "libxml2.la" && ln -s "../libxml2.la" "libxml2.la" ) make[5]: Leaving directory '/build/meme-5.1.1/src/libxml2' make[4]: Leaving directory '/build/meme-5.1.1/src/libxml2' Making all in libxslt make[4]: Entering directory '/build/meme-5.1.1/src/libxslt' /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libxslt_la-attributes.lo `test -f 'attributes.c' || echo './'`attributes.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c attributes.c -fPIC -DPIC -o .libs/libxslt_la-attributes.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libxslt_la-attrvt.lo `test -f 'attrvt.c' || echo './'`attrvt.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c attrvt.c -fPIC -DPIC -o .libs/libxslt_la-attrvt.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libxslt_la-documents.lo `test -f 'documents.c' || echo './'`documents.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c documents.c -fPIC -DPIC -o .libs/libxslt_la-documents.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libxslt_la-extensions.lo `test -f 'extensions.c' || echo './'`extensions.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c extensions.c -fPIC -DPIC -o .libs/libxslt_la-extensions.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libxslt_la-extra.lo `test -f 'extra.c' || echo './'`extra.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c extra.c -fPIC -DPIC -o .libs/libxslt_la-extra.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libxslt_la-functions.lo `test -f 'functions.c' || echo './'`functions.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c functions.c -fPIC -DPIC -o .libs/libxslt_la-functions.o functions.c: In function 'xsltGenerateIdFunction': functions.c:699:32: warning: '__builtin___sprintf_chk' may write a terminating nul past the end of the destination [-Wformat-overflow=] 699 | sprintf((char *)str, "id%ld", val); | ^ In file included from /nix/store/fwc8330z3yk4m3npi5n01qvxyvhn7rsc-glibc-2.35-224-dev/include/stdio.h:906, from ../../src/libxml2/include/libxml/xmlmemory.h:15, from functions.c:25: /nix/store/fwc8330z3yk4m3npi5n01qvxyvhn7rsc-glibc-2.35-224-dev/include/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 4 and 21 bytes into a destination of size 20 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libxslt_la-imports.lo `test -f 'imports.c' || echo './'`imports.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c imports.c -fPIC -DPIC -o .libs/libxslt_la-imports.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libxslt_la-keys.lo `test -f 'keys.c' || echo './'`keys.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c keys.c -fPIC -DPIC -o .libs/libxslt_la-keys.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libxslt_la-numbers.lo `test -f 'numbers.c' || echo './'`numbers.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c numbers.c -fPIC -DPIC -o .libs/libxslt_la-numbers.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libxslt_la-namespaces.lo `test -f 'namespaces.c' || echo './'`namespaces.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c namespaces.c -fPIC -DPIC -o .libs/libxslt_la-namespaces.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libxslt_la-pattern.lo `test -f 'pattern.c' || echo './'`pattern.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c pattern.c -fPIC -DPIC -o .libs/libxslt_la-pattern.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libxslt_la-preproc.lo `test -f 'preproc.c' || echo './'`preproc.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c preproc.c -fPIC -DPIC -o .libs/libxslt_la-preproc.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libxslt_la-security.lo `test -f 'security.c' || echo './'`security.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c security.c -fPIC -DPIC -o .libs/libxslt_la-security.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libxslt_la-templates.lo `test -f 'templates.c' || echo './'`templates.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c templates.c -fPIC -DPIC -o .libs/libxslt_la-templates.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libxslt_la-transform.lo `test -f 'transform.c' || echo './'`transform.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c transform.c -fPIC -DPIC -o .libs/libxslt_la-transform.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libxslt_la-variables.lo `test -f 'variables.c' || echo './'`variables.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c variables.c -fPIC -DPIC -o .libs/libxslt_la-variables.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libxslt_la-xslt.lo `test -f 'xslt.c' || echo './'`xslt.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c xslt.c -fPIC -DPIC -o .libs/libxslt_la-xslt.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libxslt_la-xsltlocale.lo `test -f 'xsltlocale.c' || echo './'`xsltlocale.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c xsltlocale.c -fPIC -DPIC -o .libs/libxslt_la-xsltlocale.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libxslt_la-xsltutils.lo `test -f 'xsltutils.c' || echo './'`xsltutils.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c xsltutils.c -fPIC -DPIC -o .libs/libxslt_la-xsltutils.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../../libtool --tag=CC --mode=link gcc -I../../src/libxml2/include -I../../src -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -o libxslt.la libxslt_la-attributes.lo libxslt_la-attrvt.lo libxslt_la-documents.lo libxslt_la-extensions.lo libxslt_la-extra.lo libxslt_la-functions.lo libxslt_la-imports.lo libxslt_la-keys.lo libxslt_la-numbers.lo libxslt_la-namespaces.lo libxslt_la-pattern.lo libxslt_la-preproc.lo libxslt_la-security.lo libxslt_la-templates.lo libxslt_la-transform.lo libxslt_la-variables.lo libxslt_la-xslt.lo libxslt_la-xsltlocale.lo libxslt_la-xsltutils.lo ../../src/libxml2/libxml2.la -lz -lm libtool: link: (cd .libs/libxslt.lax/libxml2.a && ar x "/build/meme-5.1.1/src/libxslt/../../src/libxml2/.libs/libxml2.a") libtool: link: ar cru .libs/libxslt.a .libs/libxslt_la-attributes.o .libs/libxslt_la-attrvt.o .libs/libxslt_la-documents.o .libs/libxslt_la-extensions.o .libs/libxslt_la-extra.o .libs/libxslt_la-functions.o .libs/libxslt_la-imports.o .libs/libxslt_la-keys.o .libs/libxslt_la-numbers.o .libs/libxslt_la-namespaces.o .libs/libxslt_la-pattern.o .libs/libxslt_la-preproc.o .libs/libxslt_la-security.o .libs/libxslt_la-templates.o .libs/libxslt_la-transform.o .libs/libxslt_la-variables.o .libs/libxslt_la-xslt.o .libs/libxslt_la-xsltlocale.o .libs/libxslt_la-xsltutils.o .libs/libxslt.lax/libxml2.a/libxml2_la-HTMLparser.o .libs/libxslt.lax/libxml2.a/libxml2_la-HTMLtree.o .libs/libxslt.lax/libxml2.a/libxml2_la-SAX2.o .libs/libxslt.lax/libxml2.a/libxml2_la-chvalid.o .libs/libxslt.lax/libxml2.a/libxml2_la-debugXML.o .libs/libxslt.lax/libxml2.a/libxml2_la-dict.o .libs/libxslt.lax/libxml2.a/libxml2_la-encoding.o .libs/libxslt.lax/libxml2.a/libxml2_la-entities.o .libs/libxslt.lax/libxml2.a/libxml2_la-error.o .libs/libxslt.lax/libxml2.a/libxml2_la-globals.o .libs/libxslt.lax/libxml2.a/libxml2_la-hash.o .libs/libxslt.lax/libxml2.a/libxml2_la-list.o .libs/libxslt.lax/libxml2.a/libxml2_la-parser.o .libs/libxslt.lax/libxml2.a/libxml2_la-parserInternals.o .libs/libxslt.lax/libxml2.a/libxml2_la-pattern.o .libs/libxslt.lax/libxml2.a/libxml2_la-relaxng.o .libs/libxslt.lax/libxml2.a/libxml2_la-threads.o .libs/libxslt.lax/libxml2.a/libxml2_la-tree.o .libs/libxslt.lax/libxml2.a/libxml2_la-uri.o .libs/libxslt.lax/libxml2.a/libxml2_la-valid.o .libs/libxslt.lax/libxml2.a/libxml2_la-xmlIO.o .libs/libxslt.lax/libxml2.a/libxml2_la-xmlmemory.o .libs/libxslt.lax/libxml2.a/libxml2_la-xmlreader.o .libs/libxslt.lax/libxml2.a/libxml2_la-xmlregexp.o .libs/libxslt.lax/libxml2.a/libxml2_la-xmlsave.o .libs/libxslt.lax/libxml2.a/libxml2_la-xmlschemas.o .libs/libxslt.lax/libxml2.a/libxml2_la-xmlschemastypes.o .libs/libxslt.lax/libxml2.a/libxml2_la-xmlstring.o .libs/libxslt.lax/libxml2.a/libxml2_la-xmlunicode.o .libs/libxslt.lax/libxml2.a/libxml2_la-xmlwriter.o .libs/libxslt.lax/libxml2.a/libxml2_la-xpath.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libxslt.a libtool: link: rm -fr .libs/libxslt.lax libtool: link: ( cd ".libs" && rm -f "libxslt.la" && ln -s "../libxslt.la" "libxslt.la" ) make[4]: Leaving directory '/build/meme-5.1.1/src/libxslt' Making all in libexslt make[4]: Entering directory '/build/meme-5.1.1/src/libexslt' /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src/ -DHAVE_MATH_H -I../../src -I../../src/libxml2/include -I../../src/libxslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libexslt_la-common.lo `test -f 'common.c' || echo './'`common.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src/ -DHAVE_MATH_H -I../../src -I../../src/libxml2/include -I../../src/libxslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c common.c -fPIC -DPIC -o .libs/libexslt_la-common.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src/ -DHAVE_MATH_H -I../../src -I../../src/libxml2/include -I../../src/libxslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libexslt_la-date.lo `test -f 'date.c' || echo './'`date.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src/ -DHAVE_MATH_H -I../../src -I../../src/libxml2/include -I../../src/libxslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c date.c -fPIC -DPIC -o .libs/libexslt_la-date.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src/ -DHAVE_MATH_H -I../../src -I../../src/libxml2/include -I../../src/libxslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libexslt_la-dynamic.lo `test -f 'dynamic.c' || echo './'`dynamic.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src/ -DHAVE_MATH_H -I../../src -I../../src/libxml2/include -I../../src/libxslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c dynamic.c -fPIC -DPIC -o .libs/libexslt_la-dynamic.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src/ -DHAVE_MATH_H -I../../src -I../../src/libxml2/include -I../../src/libxslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libexslt_la-exslt.lo `test -f 'exslt.c' || echo './'`exslt.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src/ -DHAVE_MATH_H -I../../src -I../../src/libxml2/include -I../../src/libxslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c exslt.c -fPIC -DPIC -o .libs/libexslt_la-exslt.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src/ -DHAVE_MATH_H -I../../src -I../../src/libxml2/include -I../../src/libxslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libexslt_la-functions.lo `test -f 'functions.c' || echo './'`functions.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src/ -DHAVE_MATH_H -I../../src -I../../src/libxml2/include -I../../src/libxslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c functions.c -fPIC -DPIC -o .libs/libexslt_la-functions.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src/ -DHAVE_MATH_H -I../../src -I../../src/libxml2/include -I../../src/libxslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libexslt_la-math.lo `test -f 'math.c' || echo './'`math.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src/ -DHAVE_MATH_H -I../../src -I../../src/libxml2/include -I../../src/libxslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c math.c -fPIC -DPIC -o .libs/libexslt_la-math.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src/ -DHAVE_MATH_H -I../../src -I../../src/libxml2/include -I../../src/libxslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libexslt_la-saxon.lo `test -f 'saxon.c' || echo './'`saxon.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src/ -DHAVE_MATH_H -I../../src -I../../src/libxml2/include -I../../src/libxslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c saxon.c -fPIC -DPIC -o .libs/libexslt_la-saxon.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src/ -DHAVE_MATH_H -I../../src -I../../src/libxml2/include -I../../src/libxslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libexslt_la-sets.lo `test -f 'sets.c' || echo './'`sets.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src/ -DHAVE_MATH_H -I../../src -I../../src/libxml2/include -I../../src/libxslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c sets.c -fPIC -DPIC -o .libs/libexslt_la-sets.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src/ -DHAVE_MATH_H -I../../src -I../../src/libxml2/include -I../../src/libxslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libexslt_la-strings.lo `test -f 'strings.c' || echo './'`strings.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../.. -I../../src/libxml2/include -I../../src/ -DHAVE_MATH_H -I../../src -I../../src/libxml2/include -I../../src/libxslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c strings.c -fPIC -DPIC -o .libs/libexslt_la-strings.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../../libtool --tag=CC --mode=link gcc -I../../src/libxml2/include -I../../src/ -DHAVE_MATH_H -I../../src -I../../src/libxml2/include -I../../src/libxslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -o libexslt.la libexslt_la-common.lo libexslt_la-date.lo libexslt_la-dynamic.lo libexslt_la-exslt.lo libexslt_la-functions.lo libexslt_la-math.lo libexslt_la-saxon.lo libexslt_la-sets.lo libexslt_la-strings.lo ../../src/libxml2/libxml2.la ../../src/libxslt/libxslt.la -lz -lm libtool: link: (cd .libs/libexslt.lax/libxml2.a && ar x "/build/meme-5.1.1/src/libexslt/../../src/libxml2/.libs/libxml2.a") libtool: link: (cd .libs/libexslt.lax/libxslt.a && ar x "/build/meme-5.1.1/src/libexslt/../../src/libxslt/.libs/libxslt.a") copying selected object files to avoid basename conflicts... libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-HTMLparser.o .libs/libexslt.lax/lt1-libxml2_la-HTMLparser.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-HTMLparser.o .libs/libexslt.lax/lt1-libxml2_la-HTMLparser.o libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-HTMLtree.o .libs/libexslt.lax/lt2-libxml2_la-HTMLtree.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-HTMLtree.o .libs/libexslt.lax/lt2-libxml2_la-HTMLtree.o libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-SAX2.o .libs/libexslt.lax/lt3-libxml2_la-SAX2.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-SAX2.o .libs/libexslt.lax/lt3-libxml2_la-SAX2.o libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-chvalid.o .libs/libexslt.lax/lt4-libxml2_la-chvalid.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-chvalid.o .libs/libexslt.lax/lt4-libxml2_la-chvalid.o libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-debugXML.o .libs/libexslt.lax/lt5-libxml2_la-debugXML.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-debugXML.o .libs/libexslt.lax/lt5-libxml2_la-debugXML.o libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-dict.o .libs/libexslt.lax/lt6-libxml2_la-dict.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-dict.o .libs/libexslt.lax/lt6-libxml2_la-dict.o libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-encoding.o .libs/libexslt.lax/lt7-libxml2_la-encoding.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-encoding.o .libs/libexslt.lax/lt7-libxml2_la-encoding.o libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-entities.o .libs/libexslt.lax/lt8-libxml2_la-entities.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-entities.o .libs/libexslt.lax/lt8-libxml2_la-entities.o libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-error.o .libs/libexslt.lax/lt9-libxml2_la-error.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-error.o .libs/libexslt.lax/lt9-libxml2_la-error.o libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-globals.o .libs/libexslt.lax/lt10-libxml2_la-globals.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-globals.o .libs/libexslt.lax/lt10-libxml2_la-globals.o libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-hash.o .libs/libexslt.lax/lt11-libxml2_la-hash.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-hash.o .libs/libexslt.lax/lt11-libxml2_la-hash.o libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-list.o .libs/libexslt.lax/lt12-libxml2_la-list.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-list.o .libs/libexslt.lax/lt12-libxml2_la-list.o libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-parser.o .libs/libexslt.lax/lt13-libxml2_la-parser.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-parser.o .libs/libexslt.lax/lt13-libxml2_la-parser.o libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-parserInternals.o .libs/libexslt.lax/lt14-libxml2_la-parserInternals.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-parserInternals.o .libs/libexslt.lax/lt14-libxml2_la-parserInternals.o libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-pattern.o .libs/libexslt.lax/lt15-libxml2_la-pattern.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-pattern.o .libs/libexslt.lax/lt15-libxml2_la-pattern.o libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-relaxng.o .libs/libexslt.lax/lt16-libxml2_la-relaxng.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-relaxng.o .libs/libexslt.lax/lt16-libxml2_la-relaxng.o libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-threads.o .libs/libexslt.lax/lt17-libxml2_la-threads.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-threads.o .libs/libexslt.lax/lt17-libxml2_la-threads.o libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-tree.o .libs/libexslt.lax/lt18-libxml2_la-tree.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-tree.o .libs/libexslt.lax/lt18-libxml2_la-tree.o libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-uri.o .libs/libexslt.lax/lt19-libxml2_la-uri.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-uri.o .libs/libexslt.lax/lt19-libxml2_la-uri.o libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-valid.o .libs/libexslt.lax/lt20-libxml2_la-valid.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-valid.o .libs/libexslt.lax/lt20-libxml2_la-valid.o libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-xmlIO.o .libs/libexslt.lax/lt21-libxml2_la-xmlIO.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-xmlIO.o .libs/libexslt.lax/lt21-libxml2_la-xmlIO.o libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-xmlmemory.o .libs/libexslt.lax/lt22-libxml2_la-xmlmemory.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-xmlmemory.o .libs/libexslt.lax/lt22-libxml2_la-xmlmemory.o libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-xmlreader.o .libs/libexslt.lax/lt23-libxml2_la-xmlreader.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-xmlreader.o .libs/libexslt.lax/lt23-libxml2_la-xmlreader.o libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-xmlregexp.o .libs/libexslt.lax/lt24-libxml2_la-xmlregexp.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-xmlregexp.o .libs/libexslt.lax/lt24-libxml2_la-xmlregexp.o libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-xmlsave.o .libs/libexslt.lax/lt25-libxml2_la-xmlsave.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-xmlsave.o .libs/libexslt.lax/lt25-libxml2_la-xmlsave.o libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-xmlschemas.o .libs/libexslt.lax/lt26-libxml2_la-xmlschemas.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-xmlschemas.o .libs/libexslt.lax/lt26-libxml2_la-xmlschemas.o libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-xmlschemastypes.o .libs/libexslt.lax/lt27-libxml2_la-xmlschemastypes.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-xmlschemastypes.o .libs/libexslt.lax/lt27-libxml2_la-xmlschemastypes.o libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-xmlstring.o .libs/libexslt.lax/lt28-libxml2_la-xmlstring.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-xmlstring.o .libs/libexslt.lax/lt28-libxml2_la-xmlstring.o libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-xmlunicode.o .libs/libexslt.lax/lt29-libxml2_la-xmlunicode.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-xmlunicode.o .libs/libexslt.lax/lt29-libxml2_la-xmlunicode.o libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-xmlwriter.o .libs/libexslt.lax/lt30-libxml2_la-xmlwriter.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-xmlwriter.o .libs/libexslt.lax/lt30-libxml2_la-xmlwriter.o libtool: link: ln .libs/libexslt.lax/libxslt.a/libxml2_la-xpath.o .libs/libexslt.lax/lt31-libxml2_la-xpath.o || cp .libs/libexslt.lax/libxslt.a/libxml2_la-xpath.o .libs/libexslt.lax/lt31-libxml2_la-xpath.o libtool: link: ar cru .libs/libexslt.a .libs/libexslt_la-common.o .libs/libexslt_la-date.o .libs/libexslt_la-dynamic.o .libs/libexslt_la-exslt.o .libs/libexslt_la-functions.o .libs/libexslt_la-math.o .libs/libexslt_la-saxon.o .libs/libexslt_la-sets.o .libs/libexslt_la-strings.o .libs/libexslt.lax/libxml2.a/libxml2_la-HTMLparser.o .libs/libexslt.lax/libxml2.a/libxml2_la-HTMLtree.o .libs/libexslt.lax/libxml2.a/libxml2_la-SAX2.o .libs/libexslt.lax/libxml2.a/libxml2_la-chvalid.o .libs/libexslt.lax/libxml2.a/libxml2_la-debugXML.o .libs/libexslt.lax/libxml2.a/libxml2_la-dict.o .libs/libexslt.lax/libxml2.a/libxml2_la-encoding.o .libs/libexslt.lax/libxml2.a/libxml2_la-entities.o .libs/libexslt.lax/libxml2.a/libxml2_la-error.o .libs/libexslt.lax/libxml2.a/libxml2_la-globals.o .libs/libexslt.lax/libxml2.a/libxml2_la-hash.o .libs/libexslt.lax/libxml2.a/libxml2_la-list.o .libs/libexslt.lax/libxml2.a/libxml2_la-parser.o .libs/libexslt.lax/libxml2.a/libxml2_la-parserInternals.o .libs/libexslt.lax/libxml2.a/libxml2_la-pattern.o .libs/libexslt.lax/libxml2.a/libxml2_la-relaxng.o .libs/libexslt.lax/libxml2.a/libxml2_la-threads.o .libs/libexslt.lax/libxml2.a/libxml2_la-tree.o .libs/libexslt.lax/libxml2.a/libxml2_la-uri.o .libs/libexslt.lax/libxml2.a/libxml2_la-valid.o .libs/libexslt.lax/libxml2.a/libxml2_la-xmlIO.o .libs/libexslt.lax/libxml2.a/libxml2_la-xmlmemory.o .libs/libexslt.lax/libxml2.a/libxml2_la-xmlreader.o .libs/libexslt.lax/libxml2.a/libxml2_la-xmlregexp.o .libs/libexslt.lax/libxml2.a/libxml2_la-xmlsave.o .libs/libexslt.lax/libxml2.a/libxml2_la-xmlschemas.o .libs/libexslt.lax/libxml2.a/libxml2_la-xmlschemastypes.o .libs/libexslt.lax/libxml2.a/libxml2_la-xmlstring.o .libs/libexslt.lax/libxml2.a/libxml2_la-xmlunicode.o .libs/libexslt.lax/libxml2.a/libxml2_la-xmlwriter.o .libs/libexslt.lax/libxml2.a/libxml2_la-xpath.o .libs/libexslt.lax/lt1-libxml2_la-HTMLparser.o .libs/libexslt.lax/lt2-libxml2_la-HTMLtree.o .libs/libexslt.lax/lt3-libxml2_la-SAX2.o .libs/libexslt.lax/lt4-libxml2_la-chvalid.o .libs/libexslt.lax/lt5-libxml2_la-debugXML.o .libs/libexslt.lax/lt6-libxml2_la-dict.o .libs/libexslt.lax/lt7-libxml2_la-encoding.o .libs/libexslt.lax/lt8-libxml2_la-entities.o .libs/libexslt.lax/lt9-libxml2_la-error.o .libs/libexslt.lax/lt10-libxml2_la-globals.o .libs/libexslt.lax/lt11-libxml2_la-hash.o .libs/libexslt.lax/lt12-libxml2_la-list.o .libs/libexslt.lax/lt13-libxml2_la-parser.o .libs/libexslt.lax/lt14-libxml2_la-parserInternals.o .libs/libexslt.lax/lt15-libxml2_la-pattern.o .libs/libexslt.lax/lt16-libxml2_la-relaxng.o .libs/libexslt.lax/lt17-libxml2_la-threads.o .libs/libexslt.lax/lt18-libxml2_la-tree.o .libs/libexslt.lax/lt19-libxml2_la-uri.o .libs/libexslt.lax/lt20-libxml2_la-valid.o .libs/libexslt.lax/lt21-libxml2_la-xmlIO.o .libs/libexslt.lax/lt22-libxml2_la-xmlmemory.o .libs/libexslt.lax/lt23-libxml2_la-xmlreader.o .libs/libexslt.lax/lt24-libxml2_la-xmlregexp.o .libs/libexslt.lax/lt25-libxml2_la-xmlsave.o .libs/libexslt.lax/lt26-libxml2_la-xmlschemas.o .libs/libexslt.lax/lt27-libxml2_la-xmlschemastypes.o .libs/libexslt.lax/lt28-libxml2_la-xmlstring.o .libs/libexslt.lax/lt29-libxml2_la-xmlunicode.o .libs/libexslt.lax/lt30-libxml2_la-xmlwriter.o .libs/libexslt.lax/lt31-libxml2_la-xpath.o .libs/libexslt.lax/libxslt.a/libxslt_la-attributes.o .libs/libexslt.lax/libxslt.a/libxslt_la-attrvt.o .libs/libexslt.lax/libxslt.a/libxslt_la-documents.o .libs/libexslt.lax/libxslt.a/libxslt_la-extensions.o .libs/libexslt.lax/libxslt.a/libxslt_la-extra.o .libs/libexslt.lax/libxslt.a/libxslt_la-functions.o .libs/libexslt.lax/libxslt.a/libxslt_la-imports.o .libs/libexslt.lax/libxslt.a/libxslt_la-keys.o .libs/libexslt.lax/libxslt.a/libxslt_la-namespaces.o .libs/libexslt.lax/libxslt.a/libxslt_la-numbers.o .libs/libexslt.lax/libxslt.a/libxslt_la-pattern.o .libs/libexslt.lax/libxslt.a/libxslt_la-preproc.o .libs/libexslt.lax/libxslt.a/libxslt_la-security.o .libs/libexslt.lax/libxslt.a/libxslt_la-templates.o .libs/libexslt.lax/libxslt.a/libxslt_la-transform.o .libs/libexslt.lax/libxslt.a/libxslt_la-variables.o .libs/libexslt.lax/libxslt.a/libxslt_la-xslt.o .libs/libexslt.lax/libxslt.a/libxslt_la-xsltlocale.o .libs/libexslt.lax/libxslt.a/libxslt_la-xsltutils.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libexslt.a libtool: link: rm -fr .libs/libexslt.lax .libs/libexslt.lax libtool: link: ( cd ".libs" && rm -f "libexslt.la" && ln -s "../libexslt.la" "libexslt.la" ) make[4]: Leaving directory '/build/meme-5.1.1/src/libexslt' Making all in . make[4]: Entering directory '/build/meme-5.1.1/src' gcc -DHAVE_CONFIG_H -I. -I.. -DMAIN -I../src/libxml2/include -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o ame-ame.o `test -f 'ame.c' || echo './'`ame.c gcc -DHAVE_CONFIG_H -I. -I.. -DMAIN -I../src/libxml2/include -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o ame-ramen_scan.o `test -f 'ramen_scan.c' || echo './'`ramen_scan.c gcc -DHAVE_CONFIG_H -I. -I.. -DMAIN -I../src/libxml2/include -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o ame-fisher_exact.o `test -f 'fisher_exact.c' || echo './'`fisher_exact.c /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-alignment.lo `test -f 'alignment.c' || echo './'`alignment.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c alignment.c -fPIC -DPIC -o .libs/libcommon_la-alignment.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-alph-in.lo `test -f 'alph-in.c' || echo './'`alph-in.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c alph-in.c -fPIC -DPIC -o .libs/libcommon_la-alph-in.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-alphabet.lo `test -f 'alphabet.c' || echo './'`alphabet.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c alphabet.c -fPIC -DPIC -o .libs/libcommon_la-alphabet.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-array.lo `test -f 'array.c' || echo './'`array.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c array.c -fPIC -DPIC -o .libs/libcommon_la-array.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-array-list.lo `test -f 'array-list.c' || echo './'`array-list.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c array-list.c -fPIC -DPIC -o .libs/libcommon_la-array-list.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-bates.lo `test -f 'bates.c' || echo './'`bates.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c bates.c -fPIC -DPIC -o .libs/libcommon_la-bates.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-bed.lo `test -f 'bed.c' || echo './'`bed.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c bed.c -fPIC -DPIC -o .libs/libcommon_la-bed.o bed.c: In function 'compare_bed_coords': bed.c:43:73: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] 43 | die("Result of compare_bed_coords() was ambiguous. p1 = %X p2 =%x\n", (int)p1, (int)p2); | ^ bed.c:43:82: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] 43 | die("Result of compare_bed_coords() was ambiguous. p1 = %X p2 =%x\n", (int)p1, (int)p2); | ^ /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-bed-io.lo `test -f 'bed-io.c' || echo './'`bed-io.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c bed-io.c -fPIC -DPIC -o .libs/libcommon_la-bed-io.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-binary-search.lo `test -f 'binary-search.c' || echo './'`binary-search.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c binary-search.c -fPIC -DPIC -o .libs/libcommon_la-binary-search.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-binomial.lo `test -f 'binomial.c' || echo './'`binomial.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c binomial.c -fPIC -DPIC -o .libs/libcommon_la-binomial.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-build-hmm.lo `test -f 'build-hmm.c' || echo './'`build-hmm.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c build-hmm.c -fPIC -DPIC -o .libs/libcommon_la-build-hmm.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-buffer.lo `test -f 'buffer.c' || echo './'`buffer.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c buffer.c -fPIC -DPIC -o .libs/libcommon_la-buffer.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-ceqlogo.lo `test -f 'ceqlogo.c' || echo './'`ceqlogo.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c ceqlogo.c -fPIC -DPIC -o .libs/libcommon_la-ceqlogo.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-cisml.lo `test -f 'cisml.c' || echo './'`cisml.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c cisml.c -fPIC -DPIC -o .libs/libcommon_la-cisml.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-cisml-sax.lo `test -f 'cisml-sax.c' || echo './'`cisml-sax.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c cisml-sax.c -fPIC -DPIC -o .libs/libcommon_la-cisml-sax.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-clustalw-io.lo `test -f 'clustalw-io.c' || echo './'`clustalw-io.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c clustalw-io.c -fPIC -DPIC -o .libs/libcommon_la-clustalw-io.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-dp.lo `test -f 'dp.c' || echo './'`dp.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c dp.c -fPIC -DPIC -o .libs/libcommon_la-dp.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-dreme-sax.lo `test -f 'dreme-sax.c' || echo './'`dreme-sax.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c dreme-sax.c -fPIC -DPIC -o .libs/libcommon_la-dreme-sax.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-eps2png.lo `test -f 'eps2png.c' || echo './'`eps2png.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c eps2png.c -fPIC -DPIC -o .libs/libcommon_la-eps2png.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-empirical-qvalue.lo `test -f 'empirical-qvalue.c' || echo './'`empirical-qvalue.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c empirical-qvalue.c -fPIC -DPIC -o .libs/libcommon_la-empirical-qvalue.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-evomodel.lo `test -f 'evomodel.c' || echo './'`evomodel.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c evomodel.c -fPIC -DPIC -o .libs/libcommon_la-evomodel.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-fasta-io.lo `test -f 'fasta-io.c' || echo './'`fasta-io.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c fasta-io.c -fPIC -DPIC -o .libs/libcommon_la-fasta-io.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-fasta-get-markov.lo `test -f 'fasta-get-markov.c' || echo './'`fasta-get-markov.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c fasta-get-markov.c -fPIC -DPIC -o .libs/libcommon_la-fasta-get-markov.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-fitevd.lo `test -f 'fitevd.c' || echo './'`fitevd.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c fitevd.c -fPIC -DPIC -o .libs/libcommon_la-fitevd.o fitevd.c: In function 'fit_score_distribution': fitevd.c:867:14: warning: '%.2f' directive writing between 3 and 313 bytes into a region of size between 0 and 4 [-Wformat-overflow=] 867 | "Unable to estimate E-values because they don't follow " | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ fitevd.c:868:58: note: format string is defined here 868 | "an exponential distribution (mu1 %.2f, mu2 %.2f).", | ^~~~ fitevd.c:867:14: note: assuming directive output of 4 bytes 867 | "Unable to estimate E-values because they don't follow " | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /nix/store/fwc8330z3yk4m3npi5n01qvxyvhn7rsc-glibc-2.35-224-dev/include/stdio.h:906, from fitevd.h:3, from fitevd.c:70: /nix/store/fwc8330z3yk4m3npi5n01qvxyvhn7rsc-glibc-2.35-224-dev/include/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 102 and 722 bytes into a destination of size 100 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-gendb.lo `test -f 'gendb.c' || echo './'`gendb.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c gendb.c -fPIC -DPIC -o .libs/libcommon_la-gendb.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-gtf.lo `test -f 'gtf.c' || echo './'`gtf.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c gtf.c -fPIC -DPIC -o .libs/libcommon_la-gtf.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-gtf-io.lo `test -f 'gtf-io.c' || echo './'`gtf-io.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c gtf-io.c -fPIC -DPIC -o .libs/libcommon_la-gtf-io.o gtf-io.c: In function 'read_gtf_file': gtf-io.c:313:5: warning: 'attribute_fields' may be used uninitialized in this function [-Wmaybe-uninitialized] 313 | free_string_list(attribute_fields); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-hash_table.lo `test -f 'hash_table.c' || echo './'`hash_table.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c hash_table.c -fPIC -DPIC -o .libs/libcommon_la-hash_table.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-heap.lo `test -f 'heap.c' || echo './'`heap.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c heap.c -fPIC -DPIC -o .libs/libcommon_la-heap.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-html-data.lo `test -f 'html-data.c' || echo './'`html-data.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c html-data.c -fPIC -DPIC -o .libs/libcommon_la-html-data.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-html-monolith.lo `test -f 'html-monolith.c' || echo './'`html-monolith.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c html-monolith.c -fPIC -DPIC -o .libs/libcommon_la-html-monolith.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-io.lo `test -f 'io.c' || echo './'`io.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c io.c -fPIC -DPIC -o .libs/libcommon_la-io.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-json-checker.lo `test -f 'json-checker.c' || echo './'`json-checker.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c json-checker.c -fPIC -DPIC -o .libs/libcommon_la-json-checker.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-json-reader.lo `test -f 'json-reader.c' || echo './'`json-reader.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c json-reader.c -fPIC -DPIC -o .libs/libcommon_la-json-reader.o In file included from json-reader.c:2: json-reader.c: In function 'next_token': json-reader.c:596:10: warning: suggest parentheses around assignment used as truth value [-Wparentheses] 596 | assert(jsonrd->token.state = TS_IN_PROGRESS); | ^~~~~~ /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-json-writer.lo `test -f 'json-writer.c' || echo './'`json-writer.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c json-writer.c -fPIC -DPIC -o .libs/libcommon_la-json-writer.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-karlin.lo `test -f 'karlin.c' || echo './'`karlin.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c karlin.c -fPIC -DPIC -o .libs/libcommon_la-karlin.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-linked-list.lo `test -f 'linked-list.c' || echo './'`linked-list.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c linked-list.c -fPIC -DPIC -o .libs/libcommon_la-linked-list.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-log-hmm.lo `test -f 'log-hmm.c' || echo './'`log-hmm.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c log-hmm.c -fPIC -DPIC -o .libs/libcommon_la-log-hmm.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-log_erfc.lo `test -f 'log_erfc.c' || echo './'`log_erfc.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c log_erfc.c -fPIC -DPIC -o .libs/libcommon_la-log_erfc.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-logodds.lo `test -f 'logodds.c' || echo './'`logodds.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c logodds.c -fPIC -DPIC -o .libs/libcommon_la-logodds.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-mast-util.lo `test -f 'mast-util.c' || echo './'`mast-util.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c mast-util.c -fPIC -DPIC -o .libs/libcommon_la-mast-util.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-match.lo `test -f 'match.c' || echo './'`match.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c match.c -fPIC -DPIC -o .libs/libcommon_la-match.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-matrix.lo `test -f 'matrix.c' || echo './'`matrix.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c matrix.c -fPIC -DPIC -o .libs/libcommon_la-matrix.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-mcast-match.lo `test -f 'mcast-match.c' || echo './'`mcast-match.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c mcast-match.c -fPIC -DPIC -o .libs/libcommon_la-mcast-match.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-meme-sax.lo `test -f 'meme-sax.c' || echo './'`meme-sax.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c meme-sax.c -fPIC -DPIC -o .libs/libcommon_la-meme-sax.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-metameme.lo `test -f 'metameme.c' || echo './'`metameme.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c metameme.c -fPIC -DPIC -o .libs/libcommon_la-metameme.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-mhmm.lo `test -f 'mhmm.c' || echo './'`mhmm.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c mhmm.c -fPIC -DPIC -o .libs/libcommon_la-mhmm.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-mhmms.lo `test -f 'mhmms.c' || echo './'`mhmms.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c mhmms.c -fPIC -DPIC -o .libs/libcommon_la-mhmms.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-mhmmscan.lo `test -f 'mhmmscan.c' || echo './'`mhmmscan.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c mhmmscan.c -fPIC -DPIC -o .libs/libcommon_la-mhmmscan.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-mhmm-state.lo `test -f 'mhmm-state.c' || echo './'`mhmm-state.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c mhmm-state.c -fPIC -DPIC -o .libs/libcommon_la-mhmm-state.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-momo-algorithm.lo `test -f 'momo-algorithm.c' || echo './'`momo-algorithm.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c momo-algorithm.c -fPIC -DPIC -o .libs/libcommon_la-momo-algorithm.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-momo-input.lo `test -f 'momo-input.c' || echo './'`momo-input.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c momo-input.c -fPIC -DPIC -o .libs/libcommon_la-momo-input.o In file included from /nix/store/fwc8330z3yk4m3npi5n01qvxyvhn7rsc-glibc-2.35-224-dev/include/string.h:535, from momo-input.c:8: In function 'strncat', inlined from 'get_tsv_mod_array' at momo-input.c:566:3: /nix/store/fwc8330z3yk4m3npi5n01qvxyvhn7rsc-glibc-2.35-224-dev/include/bits/string_fortified.h:138:10: warning: '__builtin_strncat' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] 138 | return __builtin___strncat_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ momo-input.c: In function 'get_tsv_mod_array': momo-input.c:566:3: note: length computed here 566 | strncat(*modless, sequence_mod_iterator, strlen(sequence_mod_iterator)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-momo-modl.lo `test -f 'momo-modl.c' || echo './'`momo-modl.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c momo-modl.c -fPIC -DPIC -o .libs/libcommon_la-momo-modl.o In file included from /nix/store/fwc8330z3yk4m3npi5n01qvxyvhn7rsc-glibc-2.35-224-dev/include/string.h:535, from momo-modl.c:8: In function 'strncat', inlined from 'regexmotif_to_string' at momo-modl.c:228:7: /nix/store/fwc8330z3yk4m3npi5n01qvxyvhn7rsc-glibc-2.35-224-dev/include/bits/string_fortified.h:138:10: warning: '__builtin_strncat' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] 138 | return __builtin___strncat_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ momo-modl.c: In function 'regexmotif_to_string': momo-modl.c:228:7: note: length computed here 228 | strncat(result, mod_info->mod_name, strlen(mod_info->mod_name)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-momo-motifx.lo `test -f 'momo-motifx.c' || echo './'`momo-motifx.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c momo-motifx.c -fPIC -DPIC -o .libs/libcommon_la-momo-motifx.o In file included from /nix/store/fwc8330z3yk4m3npi5n01qvxyvhn7rsc-glibc-2.35-224-dev/include/string.h:535, from momo-motifx.c:8: In function 'strncat', inlined from 'create_motifx_motif' at momo-motifx.c:266:5: /nix/store/fwc8330z3yk4m3npi5n01qvxyvhn7rsc-glibc-2.35-224-dev/include/bits/string_fortified.h:138:10: warning: '__builtin_strncat' specified bound depends on the length of the source argument [-Wstringop-overflow=] 138 | return __builtin___strncat_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ momo-motifx.c: In function 'create_motifx_motif': momo-motifx.c:266:36: note: length computed here 266 | strncat(pattern_name, pattern, strlen(pattern)/2); | ^~~~~~~~~~~~~~~ In file included from /nix/store/fwc8330z3yk4m3npi5n01qvxyvhn7rsc-glibc-2.35-224-dev/include/string.h:535, from momo-motifx.c:8: In function 'strncat', inlined from 'create_motifx_motif' at momo-motifx.c:268:5: /nix/store/fwc8330z3yk4m3npi5n01qvxyvhn7rsc-glibc-2.35-224-dev/include/bits/string_fortified.h:138:10: warning: '__builtin_strncat' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] 138 | return __builtin___strncat_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ momo-motifx.c: In function 'create_motifx_motif': momo-motifx.c:268:5: note: length computed here 268 | strncat(pattern_name, modname, strlen(modname)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-momo-output.lo `test -f 'momo-output.c' || echo './'`momo-output.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c momo-output.c -fPIC -DPIC -o .libs/libcommon_la-momo-output.o In file included from /nix/store/fwc8330z3yk4m3npi5n01qvxyvhn7rsc-glibc-2.35-224-dev/include/string.h:535, from macros.h:44, from utils.h:17, from array.h:14, from matrix.h:13, from motif.h:12, from motif-in.h:5, from momo-output.c:1: In function 'strncat', inlined from 'momo_print_motifs' at momo-output.c:201:7: /nix/store/fwc8330z3yk4m3npi5n01qvxyvhn7rsc-glibc-2.35-224-dev/include/bits/string_fortified.h:138:10: warning: '__builtin_strncat' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] 138 | return __builtin___strncat_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ momo-output.c: In function 'momo_print_motifs': momo-output.c:201:7: note: length computed here 201 | strncat(motif_png, motif_name, strlen(motif_name)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /nix/store/fwc8330z3yk4m3npi5n01qvxyvhn7rsc-glibc-2.35-224-dev/include/string.h:535, from macros.h:44, from utils.h:17, from array.h:14, from matrix.h:13, from motif.h:12, from motif-in.h:5, from momo-output.c:1: In function 'strncat', inlined from 'momo_print_motifs' at momo-output.c:215:7: /nix/store/fwc8330z3yk4m3npi5n01qvxyvhn7rsc-glibc-2.35-224-dev/include/bits/string_fortified.h:138:10: warning: '__builtin_strncat' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] 138 | return __builtin___strncat_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ momo-output.c: In function 'momo_print_motifs': momo-output.c:215:7: note: length computed here 215 | strncat(logo_file, options.output_dirname, strlen(options.output_dirname)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-momo-simple.lo `test -f 'momo-simple.c' || echo './'`momo-simple.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c momo-simple.c -fPIC -DPIC -o .libs/libcommon_la-momo-simple.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-motif.lo `test -f 'motif.c' || echo './'`motif.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c motif.c -fPIC -DPIC -o .libs/libcommon_la-motif.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-motif-db.lo `test -f 'motif-db.c' || echo './'`motif-db.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c motif-db.c -fPIC -DPIC -o .libs/libcommon_la-motif-db.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-motif-in.lo `test -f 'motif-in.c' || echo './'`motif-in.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c motif-in.c -fPIC -DPIC -o .libs/libcommon_la-motif-in.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-motif-in-common.lo `test -f 'motif-in-common.c' || echo './'`motif-in-common.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c motif-in-common.c -fPIC -DPIC -o .libs/libcommon_la-motif-in-common.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-motif-in-dreme-xml.lo `test -f 'motif-in-dreme-xml.c' || echo './'`motif-in-dreme-xml.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c motif-in-dreme-xml.c -fPIC -DPIC -o .libs/libcommon_la-motif-in-dreme-xml.o motif-in-dreme-xml.c: In function 'local_warning.constprop': motif-in-dreme-xml.c:105:13: warning: 'Alphabet warning: ' directive output truncated writing 18 bytes into a region of size 1 [-Wformat-truncation=] 105 | static void local_warning(CTX_T *data, char *format, ...) { | ^~~~~~~~~~~~~ In file included from /nix/store/fwc8330z3yk4m3npi5n01qvxyvhn7rsc-glibc-2.35-224-dev/include/stdio.h:906, from motif-in-dreme-xml.c:3: /nix/store/fwc8330z3yk4m3npi5n01qvxyvhn7rsc-glibc-2.35-224-dev/include/bits/stdio2.h:68:10: note: '__builtin___vsnprintf_chk' output 21 or more bytes into a destination of size 1 68 | return __builtin___vsnprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, __ap); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-motif-in-meme-html.lo `test -f 'motif-in-meme-html.c' || echo './'`motif-in-meme-html.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c motif-in-meme-html.c -fPIC -DPIC -o .libs/libcommon_la-motif-in-meme-html.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-motif-in-meme-json.lo `test -f 'motif-in-meme-json.c' || echo './'`motif-in-meme-json.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c motif-in-meme-json.c -fPIC -DPIC -o .libs/libcommon_la-motif-in-meme-json.o motif-in-meme-json.c: In function 'warning.constprop': motif-in-meme-json.c:69:13: warning: 'Alphabet warning: ' directive output truncated writing 18 bytes into a region of size 1 [-Wformat-truncation=] 69 | static void warning(void *user_data, char *format, ...) { | ^~~~~~~ In file included from /nix/store/fwc8330z3yk4m3npi5n01qvxyvhn7rsc-glibc-2.35-224-dev/include/stdio.h:906, from array.h:12, from alphabet.h:12, from alph-in.h:7, from motif-in-meme-json.c:2: /nix/store/fwc8330z3yk4m3npi5n01qvxyvhn7rsc-glibc-2.35-224-dev/include/bits/stdio2.h:68:10: note: '__builtin___vsnprintf_chk' output 20 or more bytes into a destination of size 1 68 | return __builtin___vsnprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, __ap); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-motif-in-meme-text.lo `test -f 'motif-in-meme-text.c' || echo './'`motif-in-meme-text.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c motif-in-meme-text.c -fPIC -DPIC -o .libs/libcommon_la-motif-in-meme-text.o motif-in-meme-text.c: In function 'warning.constprop': motif-in-meme-text.c:356:13: warning: 'Alphabet warning: ' directive output truncated writing 18 bytes into a region of size 1 [-Wformat-truncation=] 356 | static void warning(MTEXT_T *parser, const char *format, ...) { | ^~~~~~~ In file included from /nix/store/fwc8330z3yk4m3npi5n01qvxyvhn7rsc-glibc-2.35-224-dev/include/stdio.h:906, from motif-in-meme-text.c:5: /nix/store/fwc8330z3yk4m3npi5n01qvxyvhn7rsc-glibc-2.35-224-dev/include/bits/stdio2.h:68:10: note: '__builtin___vsnprintf_chk' output 21 or more bytes into a destination of size 1 68 | return __builtin___vsnprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, __ap); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-motif-in-meme-xml.lo `test -f 'motif-in-meme-xml.c' || echo './'`motif-in-meme-xml.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c motif-in-meme-xml.c -fPIC -DPIC -o .libs/libcommon_la-motif-in-meme-xml.o motif-in-meme-xml.c: In function 'local_warning.constprop': motif-in-meme-xml.c:176:13: warning: 'Alphabet warning: ' directive output truncated writing 18 bytes into a region of size 1 [-Wformat-truncation=] 176 | static void local_warning(CTX_T *data, char *format, ...) { | ^~~~~~~~~~~~~ In file included from /nix/store/fwc8330z3yk4m3npi5n01qvxyvhn7rsc-glibc-2.35-224-dev/include/stdio.h:906, from array.h:12, from alphabet.h:12, from alph-in.h:7, from motif-in-meme-xml.c:7: /nix/store/fwc8330z3yk4m3npi5n01qvxyvhn7rsc-glibc-2.35-224-dev/include/bits/stdio2.h:68:10: note: '__builtin___vsnprintf_chk' output 21 or more bytes into a destination of size 1 68 | return __builtin___vsnprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 | __glibc_objsize (__s), __fmt, __ap); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-motif_regexp.lo `test -f 'motif_regexp.c' || echo './'`motif_regexp.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c motif_regexp.c -fPIC -DPIC -o .libs/libcommon_la-motif_regexp.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-motiph-scoring.lo `test -f 'motiph-scoring.c' || echo './'`motiph-scoring.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c motiph-scoring.c -fPIC -DPIC -o .libs/libcommon_la-motiph-scoring.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-mtwist.lo `test -f 'mtwist.c' || echo './'`mtwist.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c mtwist.c -fPIC -DPIC -o .libs/libcommon_la-mtwist.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-object-list.lo `test -f 'object-list.c' || echo './'`object-list.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c object-list.c -fPIC -DPIC -o .libs/libcommon_la-object-list.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-order.lo `test -f 'order.c' || echo './'`order.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c order.c -fPIC -DPIC -o .libs/libcommon_la-order.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-data-block.lo `test -f 'data-block.c' || echo './'`data-block.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c data-block.c -fPIC -DPIC -o .libs/libcommon_la-data-block.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-data-block-reader.lo `test -f 'data-block-reader.c' || echo './'`data-block-reader.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c data-block-reader.c -fPIC -DPIC -o .libs/libcommon_la-data-block-reader.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-parser-message.lo `test -f 'parser-message.c' || echo './'`parser-message.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c parser-message.c -fPIC -DPIC -o .libs/libcommon_la-parser-message.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-prealigned-io.lo `test -f 'prealigned-io.c' || echo './'`prealigned-io.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c prealigned-io.c -fPIC -DPIC -o .libs/libcommon_la-prealigned-io.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-prior-reader-from-psp.lo `test -f 'prior-reader-from-psp.c' || echo './'`prior-reader-from-psp.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c prior-reader-from-psp.c -fPIC -DPIC -o .libs/libcommon_la-prior-reader-from-psp.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-prior-reader-from-wig.lo `test -f 'prior-reader-from-wig.c' || echo './'`prior-reader-from-wig.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c prior-reader-from-wig.c -fPIC -DPIC -o .libs/libcommon_la-prior-reader-from-wig.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-prior-dist.lo `test -f 'prior-dist.c' || echo './'`prior-dist.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c prior-dist.c -fPIC -DPIC -o .libs/libcommon_la-prior-dist.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-pssm.lo `test -f 'pssm.c' || echo './'`pssm.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c pssm.c -fPIC -DPIC -o .libs/libcommon_la-pssm.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-pssm-distr.lo `test -f 'pssm-distr.c' || echo './'`pssm-distr.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c pssm-distr.c -fPIC -DPIC -o .libs/libcommon_la-pssm-distr.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-qvalue.lo `test -f 'qvalue.c' || echo './'`qvalue.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c qvalue.c -fPIC -DPIC -o .libs/libcommon_la-qvalue.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-random-variate.lo `test -f 'random-variate.c' || echo './'`random-variate.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c random-variate.c -fPIC -DPIC -o .libs/libcommon_la-random-variate.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-ranksum_test.lo `test -f 'ranksum_test.c' || echo './'`ranksum_test.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c ranksum_test.c -fPIC -DPIC -o .libs/libcommon_la-ranksum_test.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-rdb-matrix.lo `test -f 'rdb-matrix.c' || echo './'`rdb-matrix.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c rdb-matrix.c -fPIC -DPIC -o .libs/libcommon_la-rdb-matrix.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-read-mhmm.lo `test -f 'read-mhmm.c' || echo './'`read-mhmm.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c read-mhmm.c -fPIC -DPIC -o .libs/libcommon_la-read-mhmm.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-read_sequence.lo `test -f 'read_sequence.c' || echo './'`read_sequence.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c read_sequence.c -fPIC -DPIC -o .libs/libcommon_la-read_sequence.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-red-black-tree.lo `test -f 'red-black-tree.c' || echo './'`red-black-tree.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c red-black-tree.c -fPIC -DPIC -o .libs/libcommon_la-red-black-tree.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-regex-utils.lo `test -f 'regex-utils.c' || echo './'`regex-utils.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c regex-utils.c -fPIC -DPIC -o .libs/libcommon_la-regex-utils.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-regress.lo `test -f 'regress.c' || echo './'`regress.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c regress.c -fPIC -DPIC -o .libs/libcommon_la-regress.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-reservoir.lo `test -f 'reservoir.c' || echo './'`reservoir.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c reservoir.c -fPIC -DPIC -o .libs/libcommon_la-reservoir.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-sax-parser-utils.lo `test -f 'sax-parser-utils.c' || echo './'`sax-parser-utils.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c sax-parser-utils.c -fPIC -DPIC -o .libs/libcommon_la-sax-parser-utils.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-scanned-sequence.lo `test -f 'scanned-sequence.c' || echo './'`scanned-sequence.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c scanned-sequence.c -fPIC -DPIC -o .libs/libcommon_la-scanned-sequence.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-scored-sites.lo `test -f 'scored-sites.c' || echo './'`scored-sites.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c scored-sites.c -fPIC -DPIC -o .libs/libcommon_la-scored-sites.o In file included from /nix/store/fwc8330z3yk4m3npi5n01qvxyvhn7rsc-glibc-2.35-224-dev/include/string.h:535, from macros.h:44, from utils.h:17, from array.h:14, from scored-sites.c:11: In function 'strncpy', inlined from 'new_scored_site' at scored-sites.c:79:3, inlined from 'add_scored_site' at scored-sites.c:125:30: /nix/store/fwc8330z3yk4m3npi5n01qvxyvhn7rsc-glibc-2.35-224-dev/include/bits/string_fortified.h:95:10: warning: '__builtin_strncpy' specified bound 100 equals destination size [-Wstringop-truncation] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'strncpy', inlined from 'new_scored_site' at scored-sites.c:80:3, inlined from 'add_scored_site' at scored-sites.c:125:30: /nix/store/fwc8330z3yk4m3npi5n01qvxyvhn7rsc-glibc-2.35-224-dev/include/bits/string_fortified.h:95:10: warning: '__builtin_strncpy' specified bound 100 equals destination size [-Wstringop-truncation] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ In function 'strncpy', inlined from 'new_scored_site' at scored-sites.c:88:3, inlined from 'add_scored_site' at scored-sites.c:125:30: /nix/store/fwc8330z3yk4m3npi5n01qvxyvhn7rsc-glibc-2.35-224-dev/include/bits/string_fortified.h:95:10: warning: '__builtin_strncpy' specified bound 100 equals destination size [-Wstringop-truncation] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-seq.lo `test -f 'seq.c' || echo './'`seq.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c seq.c -fPIC -DPIC -o .libs/libcommon_la-seq.o seq.c: In function 'shuffle_seq': seq.c:779:29: warning: '%s' directive writing 6 bytes into a region of size between 1 and 101 [-Wformat-overflow=] 769 | char *c_shuf = "_shuf_"; | ~~~~~~~~ ...... 779 | sprintf(new_seq->name, "%s%s%-i", name, c_shuf, i_copy); | ^~ seq.c:779:26: note: directive argument in the range [1, 2147483647] 779 | sprintf(new_seq->name, "%s%s%-i", name, c_shuf, i_copy); | ^~~~~~~~~ In file included from /nix/store/fwc8330z3yk4m3npi5n01qvxyvhn7rsc-glibc-2.35-224-dev/include/stdio.h:906, from array.h:12, from alphabet.h:12, from seq.c:13: /nix/store/fwc8330z3yk4m3npi5n01qvxyvhn7rsc-glibc-2.35-224-dev/include/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 8 and 117 bytes into a destination of size 101 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ In file included from /nix/store/fwc8330z3yk4m3npi5n01qvxyvhn7rsc-glibc-2.35-224-dev/include/string.h:535, from seq.c:12: In function 'strncpy', inlined from 'shuffle_seq' at seq.c:773:3: /nix/store/fwc8330z3yk4m3npi5n01qvxyvhn7rsc-glibc-2.35-224-dev/include/bits/string_fortified.h:95:10: warning: '__builtin_strncpy' output may be truncated copying 100 bytes from a string of length 100 [-Wstringop-truncation] 95 | return __builtin___strncpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 | __glibc_objsize (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~ /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-seq-reader-from-fasta.lo `test -f 'seq-reader-from-fasta.c' || echo './'`seq-reader-from-fasta.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c seq-reader-from-fasta.c -fPIC -DPIC -o .libs/libcommon_la-seq-reader-from-fasta.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-simple-getopt.lo `test -f 'simple-getopt.c' || echo './'`simple-getopt.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c simple-getopt.c -fPIC -DPIC -o .libs/libcommon_la-simple-getopt.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-spearman-rank-correlation.lo `test -f 'spearman-rank-correlation.c' || echo './'`spearman-rank-correlation.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c spearman-rank-correlation.c -fPIC -DPIC -o .libs/libcommon_la-spearman-rank-correlation.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-string-builder.lo `test -f 'string-builder.c' || echo './'`string-builder.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c string-builder.c -fPIC -DPIC -o .libs/libcommon_la-string-builder.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-string-list.lo `test -f 'string-list.c' || echo './'`string-list.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c string-list.c -fPIC -DPIC -o .libs/libcommon_la-string-list.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-string-match.lo `test -f 'string-match.c' || echo './'`string-match.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c string-match.c -fPIC -DPIC -o .libs/libcommon_la-string-match.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-subst-matrix.lo `test -f 'subst-matrix.c' || echo './'`subst-matrix.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c subst-matrix.c -fPIC -DPIC -o .libs/libcommon_la-subst-matrix.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-substmatrix-table.lo `test -f 'substmatrix-table.c' || echo './'`substmatrix-table.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c substmatrix-table.c -fPIC -DPIC -o .libs/libcommon_la-substmatrix-table.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-transfac.lo `test -f 'transfac.c' || echo './'`transfac.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c transfac.c -fPIC -DPIC -o .libs/libcommon_la-transfac.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-tree.lo `test -f 'tree.c' || echo './'`tree.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c tree.c -fPIC -DPIC -o .libs/libcommon_la-tree.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-utils.lo `test -f 'utils.c' || echo './'`utils.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c utils.c -fPIC -DPIC -o .libs/libcommon_la-utils.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-ushuffle.lo `test -f 'ushuffle.c' || echo './'`ushuffle.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c ushuffle.c -fPIC -DPIC -o .libs/libcommon_la-ushuffle.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-wiggle-reader.lo `test -f 'wiggle-reader.c' || echo './'`wiggle-reader.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c wiggle-reader.c -fPIC -DPIC -o .libs/libcommon_la-wiggle-reader.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-write-mhmm.lo `test -f 'write-mhmm.c' || echo './'`write-mhmm.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c write-mhmm.c -fPIC -DPIC -o .libs/libcommon_la-write-mhmm.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-xlate-in.lo `test -f 'xlate-in.c' || echo './'`xlate-in.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c xlate-in.c -fPIC -DPIC -o .libs/libcommon_la-xlate-in.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-xml-out.lo `test -f 'xml-out.c' || echo './'`xml-out.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c xml-out.c -fPIC -DPIC -o .libs/libcommon_la-xml-out.o xml-out.c: In function 'xmlify': xml-out.c:123:9: warning: this 'else' clause does not guard... [-Wmisleading-indentation] 123 | else str_append(buffer, " ", 4); continue; | ^~~~ xml-out.c:123:45: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'else' 123 | else str_append(buffer, " ", 4); continue; | ^~~~~~~~ xml-out.c:126:9: warning: this 'else' clause does not guard... [-Wmisleading-indentation] 126 | else str_append(buffer, " ", 5); continue; | ^~~~ xml-out.c:126:46: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'else' 126 | else str_append(buffer, " ", 5); continue; | ^~~~~~~~ xml-out.c:129:9: warning: this 'else' clause does not guard... [-Wmisleading-indentation] 129 | else str_append(buffer, " ", 5); continue; | ^~~~ xml-out.c:129:46: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'else' 129 | else str_append(buffer, " ", 5); continue; | ^~~~~~~~ xml-out.c:132:9: warning: this 'else' clause does not guard... [-Wmisleading-indentation] 132 | else str_append(buffer, """, 6); continue; | ^~~~ xml-out.c:132:47: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'else' 132 | else str_append(buffer, """, 6); continue; | ^~~~~~~~ /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o libcommon_la-xml-util.lo `test -f 'xml-util.c' || echo './'`xml-util.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c xml-util.c -fPIC -DPIC -o .libs/libcommon_la-xml-util.o /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=link gcc -fno-strict-aliasing -I../src/libxml2/include -I../src/ -I../src/libexslt -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -o libcommon.la libcommon_la-alignment.lo libcommon_la-alph-in.lo libcommon_la-alphabet.lo libcommon_la-array.lo libcommon_la-array-list.lo libcommon_la-bates.lo libcommon_la-bed.lo libcommon_la-bed-io.lo libcommon_la-binary-search.lo libcommon_la-binomial.lo libcommon_la-build-hmm.lo libcommon_la-buffer.lo libcommon_la-ceqlogo.lo libcommon_la-cisml.lo libcommon_la-cisml-sax.lo libcommon_la-clustalw-io.lo libcommon_la-dp.lo libcommon_la-dreme-sax.lo libcommon_la-eps2png.lo libcommon_la-empirical-qvalue.lo libcommon_la-evomodel.lo libcommon_la-fasta-io.lo libcommon_la-fasta-get-markov.lo libcommon_la-fitevd.lo libcommon_la-gendb.lo libcommon_la-gtf.lo libcommon_la-gtf-io.lo libcommon_la-hash_table.lo libcommon_la-heap.lo libcommon_la-html-data.lo libcommon_la-html-monolith.lo libcommon_la-io.lo libcommon_la-json-checker.lo libcommon_la-json-reader.lo libcommon_la-json-writer.lo libcommon_la-karlin.lo libcommon_la-linked-list.lo libcommon_la-log-hmm.lo libcommon_la-log_erfc.lo libcommon_la-logodds.lo libcommon_la-mast-util.lo libcommon_la-match.lo libcommon_la-matrix.lo libcommon_la-mcast-match.lo libcommon_la-meme-sax.lo libcommon_la-metameme.lo libcommon_la-mhmm.lo libcommon_la-mhmms.lo libcommon_la-mhmmscan.lo libcommon_la-mhmm-state.lo libcommon_la-momo-algorithm.lo libcommon_la-momo-input.lo libcommon_la-momo-modl.lo libcommon_la-momo-motifx.lo libcommon_la-momo-output.lo libcommon_la-momo-simple.lo libcommon_la-motif.lo libcommon_la-motif-db.lo libcommon_la-motif-in.lo libcommon_la-motif-in-common.lo libcommon_la-motif-in-dreme-xml.lo libcommon_la-motif-in-meme-html.lo libcommon_la-motif-in-meme-json.lo libcommon_la-motif-in-meme-text.lo libcommon_la-motif-in-meme-xml.lo libcommon_la-motif_regexp.lo libcommon_la-motiph-scoring.lo libcommon_la-mtwist.lo libcommon_la-object-list.lo libcommon_la-order.lo libcommon_la-data-block.lo libcommon_la-data-block-reader.lo libcommon_la-parser-message.lo libcommon_la-prealigned-io.lo libcommon_la-prior-reader-from-psp.lo libcommon_la-prior-reader-from-wig.lo libcommon_la-prior-dist.lo libcommon_la-pssm.lo libcommon_la-pssm-distr.lo libcommon_la-qvalue.lo libcommon_la-random-variate.lo libcommon_la-ranksum_test.lo libcommon_la-rdb-matrix.lo libcommon_la-read-mhmm.lo libcommon_la-read_sequence.lo libcommon_la-red-black-tree.lo libcommon_la-regex-utils.lo libcommon_la-regress.lo libcommon_la-reservoir.lo libcommon_la-sax-parser-utils.lo libcommon_la-scanned-sequence.lo libcommon_la-scored-sites.lo libcommon_la-seq.lo libcommon_la-seq-reader-from-fasta.lo libcommon_la-simple-getopt.lo libcommon_la-spearman-rank-correlation.lo libcommon_la-string-builder.lo libcommon_la-string-list.lo libcommon_la-string-match.lo libcommon_la-subst-matrix.lo libcommon_la-substmatrix-table.lo libcommon_la-transfac.lo libcommon_la-tree.lo libcommon_la-utils.lo libcommon_la-ushuffle.lo libcommon_la-wiggle-reader.lo libcommon_la-write-mhmm.lo libcommon_la-xlate-in.lo libcommon_la-xml-out.lo libcommon_la-xml-util.lo ../src/libxml2/libxml2.la ../src/libxslt/libxslt.la ../src/libexslt/libexslt.la -lm -lz -lm libtool: link: (cd .libs/libcommon.lax/libxml2.a && ar x "/build/meme-5.1.1/src/../src/libxml2/.libs/libxml2.a") libtool: link: (cd .libs/libcommon.lax/libxslt.a && ar x "/build/meme-5.1.1/src/../src/libxslt/.libs/libxslt.a") libtool: link: (cd .libs/libcommon.lax/libexslt.a && ar x "/build/meme-5.1.1/src/../src/libexslt/.libs/libexslt.a") copying selected object files to avoid basename conflicts... libtool: link: ln .libs/libcommon.lax/libxslt.a/libxml2_la-HTMLparser.o .libs/libcommon.lax/lt1-libxml2_la-HTMLparser.o || cp .libs/libcommon.lax/libxslt.a/libxml2_la-HTMLparser.o .libs/libcommon.lax/lt1-libxml2_la-HTMLparser.o libtool: link: ln .libs/libcommon.lax/libxslt.a/libxml2_la-HTMLtree.o .libs/libcommon.lax/lt2-libxml2_la-HTMLtree.o || cp 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.libs/libcommon.lax/libxslt.a/libxml2_la-encoding.o .libs/libcommon.lax/lt7-libxml2_la-encoding.o || cp .libs/libcommon.lax/libxslt.a/libxml2_la-encoding.o .libs/libcommon.lax/lt7-libxml2_la-encoding.o libtool: link: ln .libs/libcommon.lax/libxslt.a/libxml2_la-entities.o .libs/libcommon.lax/lt8-libxml2_la-entities.o || cp .libs/libcommon.lax/libxslt.a/libxml2_la-entities.o .libs/libcommon.lax/lt8-libxml2_la-entities.o libtool: link: ln .libs/libcommon.lax/libxslt.a/libxml2_la-error.o .libs/libcommon.lax/lt9-libxml2_la-error.o || cp .libs/libcommon.lax/libxslt.a/libxml2_la-error.o .libs/libcommon.lax/lt9-libxml2_la-error.o libtool: link: ln .libs/libcommon.lax/libxslt.a/libxml2_la-globals.o .libs/libcommon.lax/lt10-libxml2_la-globals.o || cp .libs/libcommon.lax/libxslt.a/libxml2_la-globals.o .libs/libcommon.lax/lt10-libxml2_la-globals.o libtool: link: ln .libs/libcommon.lax/libxslt.a/libxml2_la-hash.o .libs/libcommon.lax/lt11-libxml2_la-hash.o || cp 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.libs/libcommon.lax/libexslt.a/libxml2_la-relaxng.o .libs/libcommon.lax/lt47-libxml2_la-relaxng.o libtool: link: ln .libs/libcommon.lax/libexslt.a/libxml2_la-threads.o .libs/libcommon.lax/lt48-libxml2_la-threads.o || cp .libs/libcommon.lax/libexslt.a/libxml2_la-threads.o .libs/libcommon.lax/lt48-libxml2_la-threads.o libtool: link: ln .libs/libcommon.lax/libexslt.a/libxml2_la-tree.o .libs/libcommon.lax/lt49-libxml2_la-tree.o || cp .libs/libcommon.lax/libexslt.a/libxml2_la-tree.o .libs/libcommon.lax/lt49-libxml2_la-tree.o libtool: link: ln .libs/libcommon.lax/libexslt.a/libxml2_la-uri.o .libs/libcommon.lax/lt50-libxml2_la-uri.o || cp .libs/libcommon.lax/libexslt.a/libxml2_la-uri.o .libs/libcommon.lax/lt50-libxml2_la-uri.o libtool: link: ln .libs/libcommon.lax/libexslt.a/libxml2_la-valid.o .libs/libcommon.lax/lt51-libxml2_la-valid.o || cp .libs/libcommon.lax/libexslt.a/libxml2_la-valid.o .libs/libcommon.lax/lt51-libxml2_la-valid.o libtool: link: ln .libs/libcommon.lax/libexslt.a/libxml2_la-xmlIO.o .libs/libcommon.lax/lt52-libxml2_la-xmlIO.o || cp .libs/libcommon.lax/libexslt.a/libxml2_la-xmlIO.o .libs/libcommon.lax/lt52-libxml2_la-xmlIO.o libtool: link: ln .libs/libcommon.lax/libexslt.a/libxml2_la-xmlmemory.o .libs/libcommon.lax/lt53-libxml2_la-xmlmemory.o || cp .libs/libcommon.lax/libexslt.a/libxml2_la-xmlmemory.o .libs/libcommon.lax/lt53-libxml2_la-xmlmemory.o libtool: link: ln .libs/libcommon.lax/libexslt.a/libxml2_la-xmlreader.o .libs/libcommon.lax/lt54-libxml2_la-xmlreader.o || cp .libs/libcommon.lax/libexslt.a/libxml2_la-xmlreader.o .libs/libcommon.lax/lt54-libxml2_la-xmlreader.o libtool: link: ln .libs/libcommon.lax/libexslt.a/libxml2_la-xmlregexp.o .libs/libcommon.lax/lt55-libxml2_la-xmlregexp.o || cp .libs/libcommon.lax/libexslt.a/libxml2_la-xmlregexp.o .libs/libcommon.lax/lt55-libxml2_la-xmlregexp.o libtool: link: ln .libs/libcommon.lax/libexslt.a/libxml2_la-xmlsave.o .libs/libcommon.lax/lt56-libxml2_la-xmlsave.o || cp .libs/libcommon.lax/libexslt.a/libxml2_la-xmlsave.o .libs/libcommon.lax/lt56-libxml2_la-xmlsave.o libtool: link: ln .libs/libcommon.lax/libexslt.a/libxml2_la-xmlschemas.o .libs/libcommon.lax/lt57-libxml2_la-xmlschemas.o || cp .libs/libcommon.lax/libexslt.a/libxml2_la-xmlschemas.o .libs/libcommon.lax/lt57-libxml2_la-xmlschemas.o libtool: link: ln .libs/libcommon.lax/libexslt.a/libxml2_la-xmlschemastypes.o .libs/libcommon.lax/lt58-libxml2_la-xmlschemastypes.o || cp .libs/libcommon.lax/libexslt.a/libxml2_la-xmlschemastypes.o .libs/libcommon.lax/lt58-libxml2_la-xmlschemastypes.o libtool: link: ln .libs/libcommon.lax/libexslt.a/libxml2_la-xmlstring.o .libs/libcommon.lax/lt59-libxml2_la-xmlstring.o || cp .libs/libcommon.lax/libexslt.a/libxml2_la-xmlstring.o .libs/libcommon.lax/lt59-libxml2_la-xmlstring.o libtool: link: ln .libs/libcommon.lax/libexslt.a/libxml2_la-xmlunicode.o .libs/libcommon.lax/lt60-libxml2_la-xmlunicode.o || cp .libs/libcommon.lax/libexslt.a/libxml2_la-xmlunicode.o .libs/libcommon.lax/lt60-libxml2_la-xmlunicode.o libtool: link: ln .libs/libcommon.lax/libexslt.a/libxml2_la-xmlwriter.o .libs/libcommon.lax/lt61-libxml2_la-xmlwriter.o || cp .libs/libcommon.lax/libexslt.a/libxml2_la-xmlwriter.o .libs/libcommon.lax/lt61-libxml2_la-xmlwriter.o libtool: link: ln .libs/libcommon.lax/libexslt.a/libxml2_la-xpath.o .libs/libcommon.lax/lt62-libxml2_la-xpath.o || cp .libs/libcommon.lax/libexslt.a/libxml2_la-xpath.o .libs/libcommon.lax/lt62-libxml2_la-xpath.o libtool: link: ln .libs/libcommon.lax/libexslt.a/libxslt_la-attributes.o .libs/libcommon.lax/lt63-libxslt_la-attributes.o || cp .libs/libcommon.lax/libexslt.a/libxslt_la-attributes.o .libs/libcommon.lax/lt63-libxslt_la-attributes.o libtool: link: ln .libs/libcommon.lax/libexslt.a/libxslt_la-attrvt.o .libs/libcommon.lax/lt64-libxslt_la-attrvt.o || cp .libs/libcommon.lax/libexslt.a/libxslt_la-attrvt.o .libs/libcommon.lax/lt64-libxslt_la-attrvt.o libtool: link: ln .libs/libcommon.lax/libexslt.a/libxslt_la-documents.o .libs/libcommon.lax/lt65-libxslt_la-documents.o || cp .libs/libcommon.lax/libexslt.a/libxslt_la-documents.o .libs/libcommon.lax/lt65-libxslt_la-documents.o libtool: link: ln .libs/libcommon.lax/libexslt.a/libxslt_la-extensions.o .libs/libcommon.lax/lt66-libxslt_la-extensions.o || cp .libs/libcommon.lax/libexslt.a/libxslt_la-extensions.o .libs/libcommon.lax/lt66-libxslt_la-extensions.o libtool: link: ln .libs/libcommon.lax/libexslt.a/libxslt_la-extra.o .libs/libcommon.lax/lt67-libxslt_la-extra.o || cp .libs/libcommon.lax/libexslt.a/libxslt_la-extra.o .libs/libcommon.lax/lt67-libxslt_la-extra.o libtool: link: ln .libs/libcommon.lax/libexslt.a/libxslt_la-functions.o .libs/libcommon.lax/lt68-libxslt_la-functions.o || cp .libs/libcommon.lax/libexslt.a/libxslt_la-functions.o .libs/libcommon.lax/lt68-libxslt_la-functions.o libtool: link: ln .libs/libcommon.lax/libexslt.a/libxslt_la-imports.o .libs/libcommon.lax/lt69-libxslt_la-imports.o || 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.libs/libcommon.lax/libexslt.a/libxslt_la-preproc.o .libs/libcommon.lax/lt74-libxslt_la-preproc.o || cp .libs/libcommon.lax/libexslt.a/libxslt_la-preproc.o .libs/libcommon.lax/lt74-libxslt_la-preproc.o libtool: link: ln .libs/libcommon.lax/libexslt.a/libxslt_la-security.o .libs/libcommon.lax/lt75-libxslt_la-security.o || cp .libs/libcommon.lax/libexslt.a/libxslt_la-security.o .libs/libcommon.lax/lt75-libxslt_la-security.o libtool: link: ln .libs/libcommon.lax/libexslt.a/libxslt_la-templates.o .libs/libcommon.lax/lt76-libxslt_la-templates.o || cp .libs/libcommon.lax/libexslt.a/libxslt_la-templates.o .libs/libcommon.lax/lt76-libxslt_la-templates.o libtool: link: ln .libs/libcommon.lax/libexslt.a/libxslt_la-transform.o .libs/libcommon.lax/lt77-libxslt_la-transform.o || cp .libs/libcommon.lax/libexslt.a/libxslt_la-transform.o .libs/libcommon.lax/lt77-libxslt_la-transform.o libtool: link: ln .libs/libcommon.lax/libexslt.a/libxslt_la-variables.o .libs/libcommon.lax/lt78-libxslt_la-variables.o || cp .libs/libcommon.lax/libexslt.a/libxslt_la-variables.o .libs/libcommon.lax/lt78-libxslt_la-variables.o libtool: link: ln .libs/libcommon.lax/libexslt.a/libxslt_la-xslt.o .libs/libcommon.lax/lt79-libxslt_la-xslt.o || cp .libs/libcommon.lax/libexslt.a/libxslt_la-xslt.o .libs/libcommon.lax/lt79-libxslt_la-xslt.o libtool: link: ln .libs/libcommon.lax/libexslt.a/libxslt_la-xsltlocale.o .libs/libcommon.lax/lt80-libxslt_la-xsltlocale.o || cp .libs/libcommon.lax/libexslt.a/libxslt_la-xsltlocale.o .libs/libcommon.lax/lt80-libxslt_la-xsltlocale.o libtool: link: ln .libs/libcommon.lax/libexslt.a/libxslt_la-xsltutils.o .libs/libcommon.lax/lt81-libxslt_la-xsltutils.o || cp .libs/libcommon.lax/libexslt.a/libxslt_la-xsltutils.o .libs/libcommon.lax/lt81-libxslt_la-xsltutils.o libtool: link: ln .libs/libcommon.lax/libexslt.a/lt1-libxml2_la-HTMLparser.o .libs/libcommon.lax/lt82-lt1-libxml2_la-HTMLparser.o || cp 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libtool: link: ln .libs/libcommon.lax/libexslt.a/lt29-libxml2_la-xmlunicode.o .libs/libcommon.lax/lt103-lt29-libxml2_la-xmlunicode.o || cp .libs/libcommon.lax/libexslt.a/lt29-libxml2_la-xmlunicode.o .libs/libcommon.lax/lt103-lt29-libxml2_la-xmlunicode.o libtool: link: ln .libs/libcommon.lax/libexslt.a/lt3-libxml2_la-SAX2.o .libs/libcommon.lax/lt104-lt3-libxml2_la-SAX2.o || cp .libs/libcommon.lax/libexslt.a/lt3-libxml2_la-SAX2.o .libs/libcommon.lax/lt104-lt3-libxml2_la-SAX2.o libtool: link: ln .libs/libcommon.lax/libexslt.a/lt30-libxml2_la-xmlwriter.o .libs/libcommon.lax/lt105-lt30-libxml2_la-xmlwriter.o || cp .libs/libcommon.lax/libexslt.a/lt30-libxml2_la-xmlwriter.o .libs/libcommon.lax/lt105-lt30-libxml2_la-xmlwriter.o libtool: link: ln .libs/libcommon.lax/libexslt.a/lt31-libxml2_la-xpath.o .libs/libcommon.lax/lt106-lt31-libxml2_la-xpath.o || cp .libs/libcommon.lax/libexslt.a/lt31-libxml2_la-xpath.o .libs/libcommon.lax/lt106-lt31-libxml2_la-xpath.o libtool: link: ln 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.libs/libcommon_la-dreme-sax.o .libs/libcommon_la-eps2png.o .libs/libcommon_la-empirical-qvalue.o .libs/libcommon_la-evomodel.o .libs/libcommon_la-fasta-io.o .libs/libcommon_la-fasta-get-markov.o .libs/libcommon_la-fitevd.o .libs/libcommon_la-gendb.o .libs/libcommon_la-gtf.o .libs/libcommon_la-gtf-io.o .libs/libcommon_la-hash_table.o .libs/libcommon_la-heap.o .libs/libcommon_la-html-data.o .libs/libcommon_la-html-monolith.o .libs/libcommon_la-io.o .libs/libcommon_la-json-checker.o .libs/libcommon_la-json-reader.o .libs/libcommon_la-json-writer.o .libs/libcommon_la-karlin.o .libs/libcommon_la-linked-list.o .libs/libcommon_la-log-hmm.o .libs/libcommon_la-log_erfc.o .libs/libcommon_la-logodds.o .libs/libcommon_la-mast-util.o .libs/libcommon_la-match.o .libs/libcommon_la-matrix.o .libs/libcommon_la-mcast-match.o .libs/libcommon_la-meme-sax.o .libs/libcommon_la-metameme.o .libs/libcommon_la-mhmm.o .libs/libcommon_la-mhmms.o .libs/libcommon_la-mhmmscan.o .libs/libcommon_la-mhmm-state.o 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.libs/libcommon_la-qvalue.o .libs/libcommon_la-random-variate.o .libs/libcommon_la-ranksum_test.o .libs/libcommon_la-rdb-matrix.o .libs/libcommon_la-read-mhmm.o .libs/libcommon_la-read_sequence.o .libs/libcommon_la-red-black-tree.o .libs/libcommon_la-regex-utils.o .libs/libcommon_la-regress.o .libs/libcommon_la-reservoir.o .libs/libcommon_la-sax-parser-utils.o .libs/libcommon_la-scanned-sequence.o .libs/libcommon_la-scored-sites.o .libs/libcommon_la-seq.o .libs/libcommon_la-seq-reader-from-fasta.o .libs/libcommon_la-simple-getopt.o .libs/libcommon_la-spearman-rank-correlation.o .libs/libcommon_la-string-builder.o .libs/libcommon_la-string-list.o .libs/libcommon_la-string-match.o .libs/libcommon_la-subst-matrix.o .libs/libcommon_la-substmatrix-table.o .libs/libcommon_la-transfac.o .libs/libcommon_la-tree.o .libs/libcommon_la-utils.o .libs/libcommon_la-ushuffle.o .libs/libcommon_la-wiggle-reader.o .libs/libcommon_la-write-mhmm.o .libs/libcommon_la-xlate-in.o .libs/libcommon_la-xml-out.o .libs/libcommon_la-xml-util.o .libs/libcommon.lax/libxml2.a/libxml2_la-HTMLparser.o .libs/libcommon.lax/libxml2.a/libxml2_la-HTMLtree.o .libs/libcommon.lax/libxml2.a/libxml2_la-SAX2.o .libs/libcommon.lax/libxml2.a/libxml2_la-chvalid.o .libs/libcommon.lax/libxml2.a/libxml2_la-debugXML.o .libs/libcommon.lax/libxml2.a/libxml2_la-dict.o .libs/libcommon.lax/libxml2.a/libxml2_la-encoding.o .libs/libcommon.lax/libxml2.a/libxml2_la-entities.o .libs/libcommon.lax/libxml2.a/libxml2_la-error.o .libs/libcommon.lax/libxml2.a/libxml2_la-globals.o .libs/libcommon.lax/libxml2.a/libxml2_la-hash.o .libs/libcommon.lax/libxml2.a/libxml2_la-list.o .libs/libcommon.lax/libxml2.a/libxml2_la-parser.o .libs/libcommon.lax/libxml2.a/libxml2_la-parserInternals.o .libs/libcommon.lax/libxml2.a/libxml2_la-pattern.o .libs/libcommon.lax/libxml2.a/libxml2_la-relaxng.o .libs/libcommon.lax/libxml2.a/libxml2_la-threads.o .libs/libcommon.lax/libxml2.a/libxml2_la-tree.o .libs/libcommon.lax/libxml2.a/libxml2_la-uri.o 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-D__USE_FIXED_PROTOTYPES__ -O3 -o ame ame-ame.o ame-ramen_scan.o ame-fisher_exact.o libcommon.la ../src/libxml2/libxml2.la -lm -lz -lm libtool: link: gcc -DMAIN -I../src/libxml2/include -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -o ame ame-ame.o ame-ramen_scan.o ame-fisher_exact.o ./.libs/libcommon.a ../src/libxml2/.libs/libxml2.a -lz -lm gcc -DHAVE_CONFIG_H -I. -I.. -I../src/libxml2/include -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o centrimo-centrimo.o `test -f 'centrimo.c' || echo './'`centrimo.c gcc -DHAVE_CONFIG_H -I. -I.. -I../src/libxml2/include -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o centrimo-fisher_exact.o `test -f 'fisher_exact.c' || echo './'`fisher_exact.c /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=link gcc -I../src/libxml2/include -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -o centrimo centrimo-centrimo.o 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-std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -o fimo fimo-fimo.o fimo-fimo-output.o ./.libs/libcommon.a ../src/libxml2/.libs/libxml2.a -lz -lm gcc -DHAVE_CONFIG_H -I. -I.. -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o glam2-glam2_alphabet.o `test -f 'glam2_alphabet.c' || echo './'`glam2_alphabet.c gcc -DHAVE_CONFIG_H -I. -I.. -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o glam2-glam2_args.o `test -f 'glam2_args.c' || echo './'`glam2_args.c gcc -DHAVE_CONFIG_H -I. -I.. -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o glam2-glam2_column_sample.o `test -f 'glam2_column_sample.c' || echo './'`glam2_column_sample.c gcc -DHAVE_CONFIG_H -I. -I.. -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o glam2-glam2_dirichlet.o `test -f 'glam2_dirichlet.c' || echo './'`glam2_dirichlet.c gcc -DHAVE_CONFIG_H -I. -I.. -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 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glam2-glam2_util.o libcommon.la -lz -lm libtool: link: gcc -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -o glam2 glam2-glam2_alphabet.o glam2-glam2_args.o glam2-glam2_column_sample.o glam2-glam2_dirichlet.o glam2-glam2_dna_prior.o glam2-glam2_fasta.o glam2-glam2_glam2.o glam2-glam2_glam2_aln.o glam2-glam2_init.o glam2-glam2_output.o glam2-glam2_recode3_20comp.o glam2-glam2_site_sample.o glam2-glam2_util.o ./.libs/libcommon.a -lz -lm gcc -DHAVE_CONFIG_H -I. -I.. -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o glam2scan-glam2_alignment.o `test -f 'glam2_alignment.c' || echo './'`glam2_alignment.c gcc -DHAVE_CONFIG_H -I. -I.. -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o glam2scan-glam2_alphabet.o `test -f 'glam2_alphabet.c' || echo './'`glam2_alphabet.c gcc -DHAVE_CONFIG_H -I. -I.. -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o glam2scan-glam2_dna_prior.o `test -f 'glam2_dna_prior.c' || 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-Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o gomo-gomo.o `test -f 'gomo.c' || echo './'`gomo.c gcc -DHAVE_CONFIG_H -I. -I.. -I../src/libxml2/include -I../src/ -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o gomo-gomo_highlight.o `test -f 'gomo_highlight.c' || echo './'`gomo_highlight.c gcc -DHAVE_CONFIG_H -I. -I.. -I../src/libxml2/include -I../src/ -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o gomo-merger.o `test -f 'merger.c' || echo './'`merger.c gcc -DHAVE_CONFIG_H -I. -I.. -I../src/libxml2/include -I../src/ -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o gomo-ranksum_test.o `test -f 'ranksum_test.c' || echo './'`ranksum_test.c gcc -DHAVE_CONFIG_H -I. -I.. -I../src/libxml2/include -I../src/ -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o gomo-read_csv.o `test -f 'read_csv.c' || echo './'`read_csv.c /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash 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/nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=link gcc -I../src/libxml2/include -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -o mast mast-diagram.o mast-mast.o libcommon.la ../src/libxml2/libxml2.la -lz -lm libtool: link: gcc -I../src/libxml2/include -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -o mast mast-diagram.o mast-mast.o ./.libs/libcommon.a ../src/libxml2/.libs/libxml2.a -lz -lm gcc -DHAVE_CONFIG_H -I. -I.. -I../src/libxml2/include -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o mcast-mcast.o `test -f 'mcast.c' || echo './'`mcast.c /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=link gcc -I../src/libxml2/include -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -o mcast mcast-mcast.o libcommon.la ../src/libxml2/libxml2.la -lz -lm libtool: link: gcc -I../src/libxml2/include -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -o mcast mcast-mcast.o ./.libs/libcommon.a ../src/libxml2/.libs/libxml2.a -lz -lm gcc -DHAVE_CONFIG_H -I. -I.. -I../src/libxml2/include -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o momo-momo.o `test -f 'momo.c' || echo './'`momo.c gcc -DHAVE_CONFIG_H -I. -I.. -I../src/libxml2/include -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o momo-fisher_exact.o `test -f 'fisher_exact.c' || echo './'`fisher_exact.c /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=link gcc -I../src/libxml2/include -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -o momo momo-momo.o momo-fisher_exact.o libcommon.la ../src/libxml2/libxml2.la -lz -lm libtool: link: gcc -I../src/libxml2/include -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -o momo momo-momo.o momo-fisher_exact.o ./.libs/libcommon.a ../src/libxml2/.libs/libxml2.a -lz -lm gcc -DHAVE_CONFIG_H -I. -I.. -I../src/libxml2/include -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o spamo-cisml-sax.o `test -f 'cisml-sax.c' || echo './'`cisml-sax.c gcc -DHAVE_CONFIG_H -I. -I.. -I../src/libxml2/include -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o spamo-spamo.o `test -f 'spamo.c' || echo './'`spamo.c gcc -DHAVE_CONFIG_H -I. -I.. -I../src/libxml2/include -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o spamo-spamo-matches.o `test -f 'spamo-matches.c' || echo './'`spamo-matches.c gcc -DHAVE_CONFIG_H -I. -I.. -I../src/libxml2/include -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o spamo-spamo-output.o `test -f 'spamo-output.c' || echo './'`spamo-output.c spamo-output.c: In function 'output_sequence_matches': spamo-output.c:258:22: warning: '%s' directive output truncated writing 4 bytes into a region of size 1 [-Wformat-truncation=] 258 | const char *fmt = "%s_%s_db%d_%s.%s"; | ^~ In file included from /nix/store/fwc8330z3yk4m3npi5n01qvxyvhn7rsc-glibc-2.35-224-dev/include/stdio.h:906, from spamo-output.h:4, from spamo-output.c:8: /nix/store/fwc8330z3yk4m3npi5n01qvxyvhn7rsc-glibc-2.35-224-dev/include/bits/stdio2.h:54:10: note: '__builtin___snprintf_chk' output 15 or more bytes into a destination of size 1 54 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 55 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ gcc -DHAVE_CONFIG_H -I. -I.. -I../src/libxml2/include -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o spamo-spamo-scan.o `test -f 'spamo-scan.c' || echo './'`spamo-scan.c /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=link gcc -I../src/libxml2/include -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -o spamo spamo-cisml-sax.o spamo-spamo.o spamo-spamo-matches.o spamo-spamo-output.o spamo-spamo-scan.o libcommon.la ../src/libxml2/libxml2.la -lz -lm libtool: link: gcc -I../src/libxml2/include -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -o spamo spamo-cisml-sax.o spamo-spamo.o spamo-spamo-matches.o spamo-spamo-output.o spamo-spamo-scan.o ./.libs/libcommon.a ../src/libxml2/.libs/libxml2.a -lz -lm gcc -DHAVE_CONFIG_H -I. -I.. -I../src/libxml2/include -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o tgene-tgene.o `test -f 'tgene.c' || echo './'`tgene.c tgene.c: In function 'initialize_locus_table': tgene.c:1174:5: warning: implicit declaration of function 'asprintf'; did you mean 'vsprintf'? [-Wimplicit-function-declaration] 1174 | asprintf(&key, "%s:%ld-%ld", get_bed_chrom(reg_el), get_bed_start(reg_el), get_bed_end(reg_el)); | ^~~~~~~~ | vsprintf tgene.c: In function 'update_link_table.isra.0': tgene.c:1514:8: warning: 'distance' may be used uninitialized in this function [-Wmaybe-uninitialized] 1514 | long distance; | ^~~~~~~~ tgene.c: In function 'main': tgene.c:1835:8: warning: 'overlap' may be used uninitialized in this function [-Wmaybe-uninitialized] 1835 | while (overlap <= 0) { | ^ tgene.c:1823:6: note: 'overlap' was declared here 1823 | int overlap; | ^~~~~~~ /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=link gcc -I../src/libxml2/include -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -o tgene tgene-tgene.o libcommon.la ../src/libxml2/libxml2.la -lz -lm libtool: link: gcc -I../src/libxml2/include -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -o tgene tgene-tgene.o 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-std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -o alphtype alphtype-alphtype.o libcommon.la -lz -lm libtool: link: gcc -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -o alphtype alphtype-alphtype.o ./.libs/libcommon.a -lz -lm gcc -DHAVE_CONFIG_H -I. -I.. -I../src/libxml2/include -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o ama-ama.o `test -f 'ama.c' || echo './'`ama.c /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=link gcc -I../src/libxml2/include -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -o ama ama-ama.o libcommon.la ../src/libxml2/libxml2.la -lz -lm libtool: link: gcc -I../src/libxml2/include -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -o ama ama-ama.o ./.libs/libcommon.a ../src/libxml2/.libs/libxml2.a -lz -lm gcc -DHAVE_CONFIG_H -I. -I.. -DCL_MAIN -I../src/libxml2/include -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o ceqlogo-ceqlogo.o `test -f 'ceqlogo.c' || echo './'`ceqlogo.c /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=link gcc -DCL_MAIN -I../src/libxml2/include -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -o ceqlogo ceqlogo-ceqlogo.o libcommon.la ../src/libxml2/libxml2.la -lz -lm libtool: link: gcc -DCL_MAIN -I../src/libxml2/include -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -o ceqlogo ceqlogo-ceqlogo.o ./.libs/libcommon.a ../src/libxml2/.libs/libxml2.a -lz -lm gcc -DHAVE_CONFIG_H -I. -I.. -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o clustalw2fasta-clustalw2fasta.o `test -f 'clustalw2fasta.c' || echo './'`clustalw2fasta.c /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=link gcc -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -o clustalw2fasta clustalw2fasta-clustalw2fasta.o libcommon.la -lz -lm libtool: link: gcc -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -o clustalw2fasta clustalw2fasta-clustalw2fasta.o ./.libs/libcommon.a -lz -lm gcc -DHAVE_CONFIG_H -I. -I.. -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o clustalw2phylip-clustalw2phylip.o `test -f 'clustalw2phylip.c' || echo './'`clustalw2phylip.c /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=link gcc -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -o clustalw2phylip clustalw2phylip-clustalw2phylip.o libcommon.la -lz -lm libtool: link: gcc -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -o clustalw2phylip clustalw2phylip-clustalw2phylip.o ./.libs/libcommon.a -lz -lm gcc -DHAVE_CONFIG_H -I. -I.. -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o compute_prior_dist-compute-prior-dist.o `test -f 'compute-prior-dist.c' || echo './'`compute-prior-dist.c /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=link gcc -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -o compute-prior-dist compute_prior_dist-compute-prior-dist.o libcommon.la -lz -lm libtool: link: gcc -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -o compute-prior-dist compute_prior_dist-compute-prior-dist.o ./.libs/libcommon.a -lz -lm gcc -DHAVE_CONFIG_H -I. -I.. -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o compute_uniform_priors-compute-uniform-priors.o `test -f 'compute-uniform-priors.c' || echo './'`compute-uniform-priors.c /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=link gcc -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -o compute-uniform-priors compute_uniform_priors-compute-uniform-priors.o libcommon.la -lz -lm libtool: link: gcc -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ 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'./'`logs.c /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=link gcc -DMAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -o dtc dtc-dtc.o dtc-logs.o libcommon.la -lz -lm libtool: link: gcc -DMAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -o dtc dtc-dtc.o dtc-logs.o ./.libs/libcommon.a -lz -lm gcc -DHAVE_CONFIG_H -I. -I.. -DMAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o fasta_get_markov-fasta-get-markov.o `test -f 'fasta-get-markov.c' || echo './'`fasta-get-markov.c /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=link gcc -DMAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -o fasta-get-markov fasta_get_markov-fasta-get-markov.o libcommon.la -lz -lm libtool: link: gcc -DMAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -o fasta-get-markov fasta_get_markov-fasta-get-markov.o ./.libs/libcommon.a -lz -lm gcc -DHAVE_CONFIG_H -I. -I.. -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o fasta_shuffle_letters-fasta-shuffle-letters.o `test -f 'fasta-shuffle-letters.c' || echo './'`fasta-shuffle-letters.c gcc -DHAVE_CONFIG_H -I. -I.. -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o fasta_shuffle_letters-ushuffle.o `test -f 'ushuffle.c' || echo './'`ushuffle.c /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=link gcc -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -o fasta-shuffle-letters fasta_shuffle_letters-fasta-shuffle-letters.o fasta_shuffle_letters-ushuffle.o libcommon.la -lz -lm libtool: link: gcc -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -o fasta-shuffle-letters fasta_shuffle_letters-fasta-shuffle-letters.o fasta_shuffle_letters-ushuffle.o ./.libs/libcommon.a -lz -lm gcc -DHAVE_CONFIG_H -I. -I.. -DFE_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o fisher_exact-fisher_exact.o `test -f 'fisher_exact.c' || echo './'`fisher_exact.c /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --tag=CC --mode=link gcc -DFE_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -o fisher_exact fisher_exact-fisher_exact.o libcommon.la -lz -lm libtool: link: gcc -DFE_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -o fisher_exact fisher_exact-fisher_exact.o ./.libs/libcommon.a -lz -lm gcc -DHAVE_CONFIG_H -I. -I.. -DMAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o fitevd-fitevd.o `test -f 'fitevd.c' || echo './'`fitevd.c fitevd.c: In function 'fit_score_distribution': fitevd.c:867:14: warning: '%.2f' directive writing between 3 and 313 bytes into a region of size between 0 and 4 [-Wformat-overflow=] 867 | "Unable to estimate E-values because they don't follow " | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ fitevd.c:868:58: note: format string is defined here 868 | "an exponential distribution (mu1 %.2f, mu2 %.2f).", | ^~~~ fitevd.c:867:14: note: assuming directive output of 4 bytes 867 | "Unable to estimate E-values because they don't follow " | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /nix/store/fwc8330z3yk4m3npi5n01qvxyvhn7rsc-glibc-2.35-224-dev/include/stdio.h:906, from fitevd.h:3, from fitevd.c:70: /nix/store/fwc8330z3yk4m3npi5n01qvxyvhn7rsc-glibc-2.35-224-dev/include/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 102 and 722 bytes into a destination of size 100 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool 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xsltproc_lite-xsltproc_lite.o ../src/libxml2/libxml2.la ../src/libexslt/libexslt.la ../src/libxslt/libxslt.la -lm -lz -lm libtool: link: gcc -I../src/libxml2/include -I../src/libexslt -I../src/ -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -o xsltproc_lite xsltproc_lite-xsltproc_lite.o ../src/libxml2/.libs/libxml2.a ../src/libexslt/.libs/libexslt.a ../src/libxslt/.libs/libxslt.a -lz -lm make[4]: Leaving directory '/build/meme-5.1.1/src' Making all in parallel make[4]: Entering directory '/build/meme-5.1.1/src/parallel' gcc -DHAVE_CONFIG_H -I. -I../.. -I.. -I../../src/libxml2/include -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o ../meme-banner.o `test -f '../banner.c' || echo './'`../banner.c gcc -DHAVE_CONFIG_H -I. -I../.. -I.. -I../../src/libxml2/include -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o ../meme-bates.o `test -f '../bates.c' || echo './'`../bates.c gcc -DHAVE_CONFIG_H -I. -I../.. -I.. -I../../src/libxml2/include -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o ../meme-branching_search.o `test -f '../branching_search.c' || echo './'`../branching_search.c gcc -DHAVE_CONFIG_H -I. -I../.. -I.. -I../../src/libxml2/include -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o ../meme-calculate_p_y.o `test -f '../calculate_p_y.c' || echo './'`../calculate_p_y.c gcc -DHAVE_CONFIG_H -I. -I../.. -I.. -I../../src/libxml2/include -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o ../meme-discretize.o `test -f '../discretize.c' || echo './'`../discretize.c gcc -DHAVE_CONFIG_H -I. -I../.. -I.. -I../../src/libxml2/include -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o ../meme-display.o `test -f '../display.c' || echo './'`../display.c ../display.c: In function 'print_block_diagrams': ../display.c:644:3: warning: this 'for' clause does not guard... [-Wmisleading-indentation] 644 | for (i=0; ievt); | ^ In file included from /nix/store/fwc8330z3yk4m3npi5n01qvxyvhn7rsc-glibc-2.35-224-dev/include/stdio.h:906, from ../macros.h:42, from ../hash_table.h:16, from ../heap.h:6, from ../meme.h:5, from ../display.h:4, from ../display.c:20: /nix/store/fwc8330z3yk4m3npi5n01qvxyvhn7rsc-glibc-2.35-224-dev/include/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 9 and 14 bytes into a destination of size 12 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ ../display.c: In function 'print_meme_file_xml': ../display.c:1866:28: warning: '__builtin___sprintf_chk' may write a terminating nul past the end of the destination [-Wformat-overflow=] 1866 | sprintf(evt_string, "%g", dataset->evt); | ^ In file included from /nix/store/fwc8330z3yk4m3npi5n01qvxyvhn7rsc-glibc-2.35-224-dev/include/stdio.h:906, from ../macros.h:42, from ../hash_table.h:16, from ../heap.h:6, from ../meme.h:5, from ../display.h:4, from ../display.c:20: /nix/store/fwc8330z3yk4m3npi5n01qvxyvhn7rsc-glibc-2.35-224-dev/include/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 2 and 14 bytes into a destination of size 12 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ gcc -DHAVE_CONFIG_H -I. -I../.. -I.. -I../../src/libxml2/include -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o ../meme-dpalign.o `test -f '../dpalign.c' || echo './'`../dpalign.c gcc -DHAVE_CONFIG_H -I. -I../.. -I.. -I../../src/libxml2/include -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o ../meme-em.o `test -f '../em.c' || echo './'`../em.c gcc -DHAVE_CONFIG_H -I. -I../.. -I.. -I../../src/libxml2/include -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o ../meme-exec_parallel.o `test -f '../exec_parallel.c' || echo './'`../exec_parallel.c gcc -DHAVE_CONFIG_H -I. -I../.. -I.. -I../../src/libxml2/include -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o ../meme-fasta-get-markov.o `test -f '../fasta-get-markov.c' || echo './'`../fasta-get-markov.c gcc -DHAVE_CONFIG_H -I. -I../.. -I.. -I../../src/libxml2/include -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o ../meme-fisher_exact.o `test -f '../fisher_exact.c' || echo './'`../fisher_exact.c gcc -DHAVE_CONFIG_H -I. -I../.. -I.. -I../../src/libxml2/include -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o ../meme-init.o `test -f '../init.c' || echo './'`../init.c gcc -DHAVE_CONFIG_H -I. -I../.. -I.. -I../../src/libxml2/include -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o ../meme-justlike.o `test -f '../justlike.c' || echo './'`../justlike.c gcc -DHAVE_CONFIG_H -I. -I../.. -I.. -I../../src/libxml2/include -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o ../meme-likelihood.o `test -f '../likelihood.c' || echo './'`../likelihood.c gcc -DHAVE_CONFIG_H -I. -I../.. -I.. -I../../src/libxml2/include -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o ../meme-llr.o `test -f '../llr.c' || echo './'`../llr.c gcc -DHAVE_CONFIG_H -I. -I../.. -I.. -I../../src/libxml2/include -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o ../meme-log_erfc.o `test -f '../log_erfc.c' || echo './'`../log_erfc.c gcc -DHAVE_CONFIG_H -I. -I../.. -I.. -I../../src/libxml2/include -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o ../meme-logs.o `test -f '../logs.c' || echo './'`../logs.c gcc -DHAVE_CONFIG_H -I. -I../.. -I.. -I../../src/libxml2/include -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o ../meme-meme.o `test -f '../meme.c' || echo './'`../meme.c gcc -DHAVE_CONFIG_H -I. -I../.. -I.. -I../../src/libxml2/include -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o ../meme-meme_util.o `test -f '../meme_util.c' || echo './'`../meme_util.c gcc -DHAVE_CONFIG_H -I. -I../.. -I.. -I../../src/libxml2/include -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o ../meme-message.o `test -f '../message.c' || echo './'`../message.c gcc -DHAVE_CONFIG_H -I. -I../.. -I.. -I../../src/libxml2/include -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o ../meme-mp.o `test -f '../mp.c' || echo './'`../mp.c gcc -DHAVE_CONFIG_H -I. -I../.. -I.. -I../../src/libxml2/include -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o ../meme-oops.o `test -f '../oops.c' || echo './'`../oops.c gcc -DHAVE_CONFIG_H -I. -I../.. -I.. -I../../src/libxml2/include -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o ../meme-partition.o `test -f '../partition.c' || echo './'`../partition.c gcc -DHAVE_CONFIG_H -I. -I../.. -I.. -I../../src/libxml2/include -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o ../meme-prior.o `test -f '../prior.c' || echo './'`../prior.c gcc -DHAVE_CONFIG_H -I. -I../.. -I.. -I../../src/libxml2/include -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o ../meme-psp.o `test -f '../psp.c' || echo './'`../psp.c In file included from /nix/store/fwc8330z3yk4m3npi5n01qvxyvhn7rsc-glibc-2.35-224-dev/include/stdio.h:906, from ../macros.h:42, from ../hash_table.h:16, from ../heap.h:6, from ../meme.h:5, from ../psp.h:7, from ../psp.c:1: In function 'fprintf', inlined from 'read_psp' at ../psp.c:489:7, inlined from 'read_psp_file' at ../psp.c:94:10: /nix/store/fwc8330z3yk4m3npi5n01qvxyvhn7rsc-glibc-2.35-224-dev/include/bits/stdio2.h:79:10: warning: '%s' directive argument is null [-Wformat-overflow=] 79 | return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ gcc -DHAVE_CONFIG_H -I. -I../.. -I.. -I../../src/libxml2/include -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o ../meme-read_seq_file.o `test -f '../read_seq_file.c' || echo './'`../read_seq_file.c gcc -DHAVE_CONFIG_H -I. -I../.. -I.. -I../../src/libxml2/include -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o ../meme-seed.o `test -f '../seed.c' || echo './'`../seed.c gcc -DHAVE_CONFIG_H -I. -I../.. -I.. -I../../src/libxml2/include -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o ../meme-seed_diffs.o `test -f '../seed_diffs.c' || echo './'`../seed_diffs.c gcc -DHAVE_CONFIG_H -I. -I../.. -I.. -I../../src/libxml2/include -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o ../meme-seq2theta.o `test -f '../seq2theta.c' || echo './'`../seq2theta.c gcc -DHAVE_CONFIG_H -I. -I../.. -I.. -I../../src/libxml2/include -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o ../meme-sp_matrix.o `test -f '../sp_matrix.c' || echo './'`../sp_matrix.c gcc -DHAVE_CONFIG_H -I. -I../.. -I.. -I../../src/libxml2/include -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o ../meme-starts.o `test -f '../starts.c' || echo './'`../starts.c gcc -DHAVE_CONFIG_H -I. -I../.. -I.. -I../../src/libxml2/include -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o ../meme-subseq7.o `test -f '../subseq7.c' || echo './'`../subseq7.c gcc -DHAVE_CONFIG_H -I. -I../.. -I.. -I../../src/libxml2/include -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o ../meme-tcm.o `test -f '../tcm.c' || echo './'`../tcm.c gcc -DHAVE_CONFIG_H -I. -I../.. -I.. -I../../src/libxml2/include -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o ../meme-ushuffle.o `test -f '../ushuffle.c' || echo './'`../ushuffle.c gcc -DHAVE_CONFIG_H -I. -I../.. -I.. -I../../src/libxml2/include -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -c -o ../meme-verbosity.o `test -f '../verbosity.c' || echo './'`../verbosity.c /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../../libtool --tag=CC --mode=link gcc -I.. -I../../src/libxml2/include -DMPI_CMD="" -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -o meme ../meme-banner.o ../meme-bates.o ../meme-branching_search.o ../meme-calculate_p_y.o ../meme-discretize.o ../meme-display.o ../meme-dpalign.o ../meme-em.o ../meme-exec_parallel.o ../meme-fasta-get-markov.o ../meme-fisher_exact.o ../meme-init.o ../meme-justlike.o ../meme-likelihood.o ../meme-llr.o ../meme-log_erfc.o ../meme-logs.o ../meme-meme.o ../meme-meme_util.o ../meme-message.o ../meme-mp.o ../meme-oops.o ../meme-partition.o ../meme-prior.o ../meme-psp.o ../meme-read_seq_file.o ../meme-seed.o ../meme-seed_diffs.o ../meme-seq2theta.o ../meme-sp_matrix.o ../meme-starts.o ../meme-subseq7.o ../meme-tcm.o ../meme-ushuffle.o ../meme-verbosity.o ../libcommon.la ../../src/libxml2/libxml2.la -lz -lm libtool: link: gcc -I.. -I../../src/libxml2/include -DMPI_CMD= -DMEME_MAIN -std=gnu89 -Wall -Wno-unused -DUNIX -D__USE_FIXED_PROTOTYPES__ -O3 -o meme ../meme-banner.o ../meme-bates.o ../meme-branching_search.o ../meme-calculate_p_y.o ../meme-discretize.o ../meme-display.o ../meme-dpalign.o ../meme-em.o ../meme-exec_parallel.o ../meme-fasta-get-markov.o ../meme-fisher_exact.o ../meme-init.o ../meme-justlike.o ../meme-likelihood.o ../meme-llr.o ../meme-log_erfc.o ../meme-logs.o ../meme-meme.o ../meme-meme_util.o ../meme-message.o ../meme-mp.o ../meme-oops.o ../meme-partition.o ../meme-prior.o ../meme-psp.o ../meme-read_seq_file.o ../meme-seed.o ../meme-seed_diffs.o ../meme-seq2theta.o ../meme-sp_matrix.o ../meme-starts.o ../meme-subseq7.o ../meme-tcm.o ../meme-ushuffle.o ../meme-verbosity.o ../.libs/libcommon.a ../../src/libxml2/.libs/libxml2.a -lz -lm /nix/store/cwivsnh1p591x7yydynrz0xc1zcq54p3-binutils-2.39/bin/ld: ../meme-meme_util.o: in function `init_meme_background': meme_util.c:(.text+0x2468): warning: the use of `mktemp' is dangerous, better use `mkstemp' or `mkdtemp' make[4]: Leaving directory '/build/meme-5.1.1/src/parallel' make[3]: Leaving directory '/build/meme-5.1.1/src' make[2]: Leaving directory '/build/meme-5.1.1/src' Making all in scripts make[2]: Entering directory '/build/meme-5.1.1/scripts' /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%@ARCHIVE_REVISION@%1ec0cac75da38ade3bb84e84d35520ca52977940%' -e 's%@ARCHIVE_DATE@%Wed Jan 29 15:00:42 2020 -0800%' -e 's%@ARCHIVE_VERSION@%5.1.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHMONO@%%' -e 's%@WHICHPERL@%/nix/store/qjkhzhzav2bkifw5kis91ckzv9sjjpj7-perl-5.36.0/bin/perl%' -e 's%@WHICHPYTHON@%/nix/store/ar76b3831ydkmfhf0r9v3wbma5i61iz2-python3-3.10.9/bin/python%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%%' -e 's%@PERLLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/perl%' -e 's%@PYTHONLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/python%' -e 's%@JAVALIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1%' -e 's%@BINDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin%' -e 's%@LIBEXECDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1%' -e 's%@MEMELOGS@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/var/meme-5.1.1/LOGS%' -e 's%@MEMEDB@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/db%' -e 's%@SITE_URL@%http://meme-suite.org%g' -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/%' meme-chip.pl.in > meme-chip; \ chmod +x meme-chip /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%@ARCHIVE_REVISION@%1ec0cac75da38ade3bb84e84d35520ca52977940%' -e 's%@ARCHIVE_DATE@%Wed Jan 29 15:00:42 2020 -0800%' -e 's%@ARCHIVE_VERSION@%5.1.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHMONO@%%' -e 's%@WHICHPERL@%/nix/store/qjkhzhzav2bkifw5kis91ckzv9sjjpj7-perl-5.36.0/bin/perl%' -e 's%@WHICHPYTHON@%/nix/store/ar76b3831ydkmfhf0r9v3wbma5i61iz2-python3-3.10.9/bin/python%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%%' -e 's%@PERLLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/perl%' -e 's%@PYTHONLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/python%' -e 's%@JAVALIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1%' -e 's%@BINDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin%' -e 's%@LIBEXECDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1%' -e 's%@MEMELOGS@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/var/meme-5.1.1/LOGS%' -e 's%@MEMEDB@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/db%' -e 's%@SITE_URL@%http://meme-suite.org%g' -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/%' dreme_py3.py.in > dreme; \ chmod +x dreme rm -f ../src/dreme ln dreme ../src/dreme # Copy to src for testing purposes /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%@ARCHIVE_REVISION@%1ec0cac75da38ade3bb84e84d35520ca52977940%' -e 's%@ARCHIVE_DATE@%Wed Jan 29 15:00:42 2020 -0800%' -e 's%@ARCHIVE_VERSION@%5.1.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHMONO@%%' -e 's%@WHICHPERL@%/nix/store/qjkhzhzav2bkifw5kis91ckzv9sjjpj7-perl-5.36.0/bin/perl%' -e 's%@WHICHPYTHON@%/nix/store/ar76b3831ydkmfhf0r9v3wbma5i61iz2-python3-3.10.9/bin/python%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%%' -e 's%@PERLLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/perl%' -e 's%@PYTHONLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/python%' -e 's%@JAVALIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1%' -e 's%@BINDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin%' -e 's%@LIBEXECDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1%' -e 's%@MEMELOGS@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/var/meme-5.1.1/LOGS%' -e 's%@MEMEDB@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/db%' -e 's%@SITE_URL@%http://meme-suite.org%g' -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/%' ama-qvalues.pl.in > ama-qvalues; \ chmod +x ama-qvalues /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%@ARCHIVE_REVISION@%1ec0cac75da38ade3bb84e84d35520ca52977940%' -e 's%@ARCHIVE_DATE@%Wed Jan 29 15:00:42 2020 -0800%' -e 's%@ARCHIVE_VERSION@%5.1.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHMONO@%%' -e 's%@WHICHPERL@%/nix/store/qjkhzhzav2bkifw5kis91ckzv9sjjpj7-perl-5.36.0/bin/perl%' -e 's%@WHICHPYTHON@%/nix/store/ar76b3831ydkmfhf0r9v3wbma5i61iz2-python3-3.10.9/bin/python%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%%' -e 's%@PERLLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/perl%' -e 's%@PYTHONLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/python%' -e 's%@JAVALIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1%' -e 's%@BINDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin%' -e 's%@LIBEXECDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1%' -e 's%@MEMELOGS@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/var/meme-5.1.1/LOGS%' -e 's%@MEMEDB@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/db%' -e 's%@SITE_URL@%http://meme-suite.org%g' -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/%' beeml2meme.pl.in > beeml2meme; \ chmod +x beeml2meme /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%@ARCHIVE_REVISION@%1ec0cac75da38ade3bb84e84d35520ca52977940%' -e 's%@ARCHIVE_DATE@%Wed Jan 29 15:00:42 2020 -0800%' -e 's%@ARCHIVE_VERSION@%5.1.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHMONO@%%' -e 's%@WHICHPERL@%/nix/store/qjkhzhzav2bkifw5kis91ckzv9sjjpj7-perl-5.36.0/bin/perl%' -e 's%@WHICHPYTHON@%/nix/store/ar76b3831ydkmfhf0r9v3wbma5i61iz2-python3-3.10.9/bin/python%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%%' -e 's%@PERLLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/perl%' -e 's%@PYTHONLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/python%' -e 's%@JAVALIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1%' -e 's%@BINDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin%' -e 's%@LIBEXECDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1%' -e 's%@MEMELOGS@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/var/meme-5.1.1/LOGS%' -e 's%@MEMEDB@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/db%' -e 's%@SITE_URL@%http://meme-suite.org%g' -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/%' dreme_xml_to_html.pl.in > dreme_xml_to_html; \ chmod +x dreme_xml_to_html /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%@ARCHIVE_REVISION@%1ec0cac75da38ade3bb84e84d35520ca52977940%' -e 's%@ARCHIVE_DATE@%Wed Jan 29 15:00:42 2020 -0800%' -e 's%@ARCHIVE_VERSION@%5.1.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHMONO@%%' -e 's%@WHICHPERL@%/nix/store/qjkhzhzav2bkifw5kis91ckzv9sjjpj7-perl-5.36.0/bin/perl%' -e 's%@WHICHPYTHON@%/nix/store/ar76b3831ydkmfhf0r9v3wbma5i61iz2-python3-3.10.9/bin/python%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%%' -e 's%@PERLLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/perl%' -e 's%@PYTHONLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/python%' -e 's%@JAVALIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1%' -e 's%@BINDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin%' -e 's%@LIBEXECDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1%' -e 's%@MEMELOGS@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/var/meme-5.1.1/LOGS%' -e 's%@MEMEDB@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/db%' -e 's%@SITE_URL@%http://meme-suite.org%g' -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/%' dreme_xml_to_txt.pl.in > dreme_xml_to_txt; \ chmod +x dreme_xml_to_txt /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%@ARCHIVE_REVISION@%1ec0cac75da38ade3bb84e84d35520ca52977940%' -e 's%@ARCHIVE_DATE@%Wed Jan 29 15:00:42 2020 -0800%' -e 's%@ARCHIVE_VERSION@%5.1.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHMONO@%%' -e 's%@WHICHPERL@%/nix/store/qjkhzhzav2bkifw5kis91ckzv9sjjpj7-perl-5.36.0/bin/perl%' -e 's%@WHICHPYTHON@%/nix/store/ar76b3831ydkmfhf0r9v3wbma5i61iz2-python3-3.10.9/bin/python%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%%' -e 's%@PERLLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/perl%' -e 's%@PYTHONLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/python%' -e 's%@JAVALIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1%' -e 's%@BINDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin%' -e 's%@LIBEXECDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1%' -e 's%@MEMELOGS@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/var/meme-5.1.1/LOGS%' -e 's%@MEMEDB@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/db%' -e 's%@SITE_URL@%http://meme-suite.org%g' -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/%' elm2meme.pl.in > elm2meme; \ chmod +x elm2meme /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%@ARCHIVE_REVISION@%1ec0cac75da38ade3bb84e84d35520ca52977940%' -e 's%@ARCHIVE_DATE@%Wed Jan 29 15:00:42 2020 -0800%' -e 's%@ARCHIVE_VERSION@%5.1.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHMONO@%%' -e 's%@WHICHPERL@%/nix/store/qjkhzhzav2bkifw5kis91ckzv9sjjpj7-perl-5.36.0/bin/perl%' -e 's%@WHICHPYTHON@%/nix/store/ar76b3831ydkmfhf0r9v3wbma5i61iz2-python3-3.10.9/bin/python%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%%' -e 's%@PERLLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/perl%' -e 's%@PYTHONLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/python%' -e 's%@JAVALIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1%' -e 's%@BINDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin%' -e 's%@LIBEXECDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1%' -e 's%@MEMELOGS@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/var/meme-5.1.1/LOGS%' -e 's%@MEMEDB@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/db%' -e 's%@SITE_URL@%http://meme-suite.org%g' -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/%' fasta-center.pl.in > fasta-center; \ chmod +x fasta-center /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%@ARCHIVE_REVISION@%1ec0cac75da38ade3bb84e84d35520ca52977940%' -e 's%@ARCHIVE_DATE@%Wed Jan 29 15:00:42 2020 -0800%' -e 's%@ARCHIVE_VERSION@%5.1.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHMONO@%%' -e 's%@WHICHPERL@%/nix/store/qjkhzhzav2bkifw5kis91ckzv9sjjpj7-perl-5.36.0/bin/perl%' -e 's%@WHICHPYTHON@%/nix/store/ar76b3831ydkmfhf0r9v3wbma5i61iz2-python3-3.10.9/bin/python%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%%' -e 's%@PERLLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/perl%' -e 's%@PYTHONLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/python%' -e 's%@JAVALIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1%' -e 's%@BINDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin%' -e 's%@LIBEXECDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1%' -e 's%@MEMELOGS@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/var/meme-5.1.1/LOGS%' -e 's%@MEMEDB@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/db%' -e 's%@SITE_URL@%http://meme-suite.org%g' -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/%' fasta-dinucleotide-shuffle-py3.in > fasta-dinucleotide-shuffle; \ chmod +x fasta-dinucleotide-shuffle /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%@ARCHIVE_REVISION@%1ec0cac75da38ade3bb84e84d35520ca52977940%' -e 's%@ARCHIVE_DATE@%Wed Jan 29 15:00:42 2020 -0800%' -e 's%@ARCHIVE_VERSION@%5.1.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHMONO@%%' -e 's%@WHICHPERL@%/nix/store/qjkhzhzav2bkifw5kis91ckzv9sjjpj7-perl-5.36.0/bin/perl%' -e 's%@WHICHPYTHON@%/nix/store/ar76b3831ydkmfhf0r9v3wbma5i61iz2-python3-3.10.9/bin/python%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%%' -e 's%@PERLLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/perl%' -e 's%@PYTHONLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/python%' -e 's%@JAVALIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1%' -e 's%@BINDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin%' -e 's%@LIBEXECDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1%' -e 's%@MEMELOGS@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/var/meme-5.1.1/LOGS%' -e 's%@MEMEDB@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/db%' -e 's%@SITE_URL@%http://meme-suite.org%g' -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/%' fasta-fetch.pl.in > fasta-fetch; \ chmod +x fasta-fetch /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%@ARCHIVE_REVISION@%1ec0cac75da38ade3bb84e84d35520ca52977940%' -e 's%@ARCHIVE_DATE@%Wed Jan 29 15:00:42 2020 -0800%' -e 's%@ARCHIVE_VERSION@%5.1.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHMONO@%%' -e 's%@WHICHPERL@%/nix/store/qjkhzhzav2bkifw5kis91ckzv9sjjpj7-perl-5.36.0/bin/perl%' -e 's%@WHICHPYTHON@%/nix/store/ar76b3831ydkmfhf0r9v3wbma5i61iz2-python3-3.10.9/bin/python%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%%' -e 's%@PERLLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/perl%' -e 's%@PYTHONLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/python%' -e 's%@JAVALIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1%' -e 's%@BINDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin%' -e 's%@LIBEXECDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1%' -e 's%@MEMELOGS@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/var/meme-5.1.1/LOGS%' -e 's%@MEMEDB@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/db%' -e 's%@SITE_URL@%http://meme-suite.org%g' -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/%' fasta-hamming-enrich-py3.in > fasta-hamming-enrich; \ chmod +x fasta-hamming-enrich /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%@ARCHIVE_REVISION@%1ec0cac75da38ade3bb84e84d35520ca52977940%' -e 's%@ARCHIVE_DATE@%Wed Jan 29 15:00:42 2020 -0800%' -e 's%@ARCHIVE_VERSION@%5.1.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHMONO@%%' -e 's%@WHICHPERL@%/nix/store/qjkhzhzav2bkifw5kis91ckzv9sjjpj7-perl-5.36.0/bin/perl%' -e 's%@WHICHPYTHON@%/nix/store/ar76b3831ydkmfhf0r9v3wbma5i61iz2-python3-3.10.9/bin/python%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%%' -e 's%@PERLLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/perl%' -e 's%@PYTHONLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/python%' -e 's%@JAVALIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1%' -e 's%@BINDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin%' -e 's%@LIBEXECDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1%' -e 's%@MEMELOGS@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/var/meme-5.1.1/LOGS%' -e 's%@MEMEDB@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/db%' -e 's%@SITE_URL@%http://meme-suite.org%g' -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/%' fasta-make-index.pl.in > fasta-make-index; \ chmod +x fasta-make-index /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%@ARCHIVE_REVISION@%1ec0cac75da38ade3bb84e84d35520ca52977940%' -e 's%@ARCHIVE_DATE@%Wed Jan 29 15:00:42 2020 -0800%' -e 's%@ARCHIVE_VERSION@%5.1.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHMONO@%%' -e 's%@WHICHPERL@%/nix/store/qjkhzhzav2bkifw5kis91ckzv9sjjpj7-perl-5.36.0/bin/perl%' -e 's%@WHICHPYTHON@%/nix/store/ar76b3831ydkmfhf0r9v3wbma5i61iz2-python3-3.10.9/bin/python%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%%' -e 's%@PERLLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/perl%' -e 's%@PYTHONLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/python%' -e 's%@JAVALIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1%' -e 's%@BINDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin%' -e 's%@LIBEXECDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1%' -e 's%@MEMELOGS@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/var/meme-5.1.1/LOGS%' -e 's%@MEMEDB@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/db%' -e 's%@SITE_URL@%http://meme-suite.org%g' -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/%' fasta-most.pl.in > fasta-most; \ chmod +x fasta-most /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%@ARCHIVE_REVISION@%1ec0cac75da38ade3bb84e84d35520ca52977940%' -e 's%@ARCHIVE_DATE@%Wed Jan 29 15:00:42 2020 -0800%' -e 's%@ARCHIVE_VERSION@%5.1.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHMONO@%%' -e 's%@WHICHPERL@%/nix/store/qjkhzhzav2bkifw5kis91ckzv9sjjpj7-perl-5.36.0/bin/perl%' -e 's%@WHICHPYTHON@%/nix/store/ar76b3831ydkmfhf0r9v3wbma5i61iz2-python3-3.10.9/bin/python%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%%' -e 's%@PERLLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/perl%' -e 's%@PYTHONLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/python%' -e 's%@JAVALIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1%' -e 's%@BINDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin%' -e 's%@LIBEXECDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1%' -e 's%@MEMELOGS@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/var/meme-5.1.1/LOGS%' -e 's%@MEMEDB@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/db%' -e 's%@SITE_URL@%http://meme-suite.org%g' -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/%' fasta-re-match.pl.in > fasta-re-match; \ chmod +x fasta-re-match /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%@ARCHIVE_REVISION@%1ec0cac75da38ade3bb84e84d35520ca52977940%' -e 's%@ARCHIVE_DATE@%Wed Jan 29 15:00:42 2020 -0800%' -e 's%@ARCHIVE_VERSION@%5.1.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHMONO@%%' -e 's%@WHICHPERL@%/nix/store/qjkhzhzav2bkifw5kis91ckzv9sjjpj7-perl-5.36.0/bin/perl%' -e 's%@WHICHPYTHON@%/nix/store/ar76b3831ydkmfhf0r9v3wbma5i61iz2-python3-3.10.9/bin/python%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%%' -e 's%@PERLLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/perl%' -e 's%@PYTHONLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/python%' -e 's%@JAVALIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1%' -e 's%@BINDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin%' -e 's%@LIBEXECDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1%' -e 's%@MEMELOGS@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/var/meme-5.1.1/LOGS%' -e 's%@MEMEDB@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/db%' -e 's%@SITE_URL@%http://meme-suite.org%g' -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/%' fasta-subsample.pl.in > fasta-subsample; \ chmod +x fasta-subsample /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%@ARCHIVE_REVISION@%1ec0cac75da38ade3bb84e84d35520ca52977940%' -e 's%@ARCHIVE_DATE@%Wed Jan 29 15:00:42 2020 -0800%' -e 's%@ARCHIVE_VERSION@%5.1.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHMONO@%%' -e 's%@WHICHPERL@%/nix/store/qjkhzhzav2bkifw5kis91ckzv9sjjpj7-perl-5.36.0/bin/perl%' -e 's%@WHICHPYTHON@%/nix/store/ar76b3831ydkmfhf0r9v3wbma5i61iz2-python3-3.10.9/bin/python%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%%' -e 's%@PERLLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/perl%' -e 's%@PYTHONLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/python%' -e 's%@JAVALIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1%' -e 's%@BINDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin%' -e 's%@LIBEXECDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1%' -e 's%@MEMELOGS@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/var/meme-5.1.1/LOGS%' -e 's%@MEMEDB@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/db%' -e 's%@SITE_URL@%http://meme-suite.org%g' -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/%' fasta-unique-names.pl.in > fasta-unique-names; \ chmod +x fasta-unique-names /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%@ARCHIVE_REVISION@%1ec0cac75da38ade3bb84e84d35520ca52977940%' -e 's%@ARCHIVE_DATE@%Wed Jan 29 15:00:42 2020 -0800%' -e 's%@ARCHIVE_VERSION@%5.1.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHMONO@%%' -e 's%@WHICHPERL@%/nix/store/qjkhzhzav2bkifw5kis91ckzv9sjjpj7-perl-5.36.0/bin/perl%' -e 's%@WHICHPYTHON@%/nix/store/ar76b3831ydkmfhf0r9v3wbma5i61iz2-python3-3.10.9/bin/python%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%%' -e 's%@PERLLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/perl%' -e 's%@PYTHONLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/python%' -e 's%@JAVALIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1%' -e 's%@BINDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin%' -e 's%@LIBEXECDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1%' -e 's%@MEMELOGS@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/var/meme-5.1.1/LOGS%' -e 's%@MEMEDB@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/db%' -e 's%@SITE_URL@%http://meme-suite.org%g' -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/%' glam2html-py3.in > glam2html; \ chmod +x glam2html rm -f ../src/glam2html ln glam2html ../src/glam2html # Copy to src for testing purposes /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%@ARCHIVE_REVISION@%1ec0cac75da38ade3bb84e84d35520ca52977940%' -e 's%@ARCHIVE_DATE@%Wed Jan 29 15:00:42 2020 -0800%' -e 's%@ARCHIVE_VERSION@%5.1.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHMONO@%%' -e 's%@WHICHPERL@%/nix/store/qjkhzhzav2bkifw5kis91ckzv9sjjpj7-perl-5.36.0/bin/perl%' -e 's%@WHICHPYTHON@%/nix/store/ar76b3831ydkmfhf0r9v3wbma5i61iz2-python3-3.10.9/bin/python%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%%' -e 's%@PERLLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/perl%' -e 's%@PYTHONLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/python%' -e 's%@JAVALIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1%' -e 's%@BINDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin%' -e 's%@LIBEXECDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1%' -e 's%@MEMELOGS@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/var/meme-5.1.1/LOGS%' -e 's%@MEMEDB@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/db%' -e 's%@SITE_URL@%http://meme-suite.org%g' -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/%' glam2psfm-py3.in > glam2psfm; \ chmod +x glam2psfm rm -f ../src/glam2psfm ln glam2psfm ../src/glam2psfm # Copy to src for testing purposes /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%@ARCHIVE_REVISION@%1ec0cac75da38ade3bb84e84d35520ca52977940%' -e 's%@ARCHIVE_DATE@%Wed Jan 29 15:00:42 2020 -0800%' -e 's%@ARCHIVE_VERSION@%5.1.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHMONO@%%' -e 's%@WHICHPERL@%/nix/store/qjkhzhzav2bkifw5kis91ckzv9sjjpj7-perl-5.36.0/bin/perl%' -e 's%@WHICHPYTHON@%/nix/store/ar76b3831ydkmfhf0r9v3wbma5i61iz2-python3-3.10.9/bin/python%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%%' -e 's%@PERLLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/perl%' -e 's%@PYTHONLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/python%' -e 's%@JAVALIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1%' -e 's%@BINDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin%' -e 's%@LIBEXECDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1%' -e 's%@MEMELOGS@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/var/meme-5.1.1/LOGS%' -e 's%@MEMEDB@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/db%' -e 's%@SITE_URL@%http://meme-suite.org%g' -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/%' glam2scan2html-py3.in > glam2scan2html; \ chmod +x glam2scan2html rm -f ../src/glam2scan2html ln glam2scan2html ../src/glam2scan2html # Copy to src for testing purposes /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%@ARCHIVE_REVISION@%1ec0cac75da38ade3bb84e84d35520ca52977940%' -e 's%@ARCHIVE_DATE@%Wed Jan 29 15:00:42 2020 -0800%' -e 's%@ARCHIVE_VERSION@%5.1.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHMONO@%%' -e 's%@WHICHPERL@%/nix/store/qjkhzhzav2bkifw5kis91ckzv9sjjpj7-perl-5.36.0/bin/perl%' -e 's%@WHICHPYTHON@%/nix/store/ar76b3831ydkmfhf0r9v3wbma5i61iz2-python3-3.10.9/bin/python%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%%' -e 's%@PERLLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/perl%' -e 's%@PYTHONLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/python%' -e 's%@JAVALIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1%' -e 's%@BINDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin%' -e 's%@LIBEXECDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1%' -e 's%@MEMELOGS@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/var/meme-5.1.1/LOGS%' -e 's%@MEMEDB@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/db%' -e 's%@SITE_URL@%http://meme-suite.org%g' -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/%' chen2meme.pl.in > chen2meme; \ chmod +x chen2meme /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%@ARCHIVE_REVISION@%1ec0cac75da38ade3bb84e84d35520ca52977940%' -e 's%@ARCHIVE_DATE@%Wed Jan 29 15:00:42 2020 -0800%' -e 's%@ARCHIVE_VERSION@%5.1.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHMONO@%%' -e 's%@WHICHPERL@%/nix/store/qjkhzhzav2bkifw5kis91ckzv9sjjpj7-perl-5.36.0/bin/perl%' -e 's%@WHICHPYTHON@%/nix/store/ar76b3831ydkmfhf0r9v3wbma5i61iz2-python3-3.10.9/bin/python%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%%' -e 's%@PERLLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/perl%' -e 's%@PYTHONLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/python%' -e 's%@JAVALIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1%' -e 's%@BINDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin%' -e 's%@LIBEXECDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1%' -e 's%@MEMELOGS@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/var/meme-5.1.1/LOGS%' -e 's%@MEMEDB@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/db%' -e 's%@SITE_URL@%http://meme-suite.org%g' -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/%' jaspar2meme.pl.in > jaspar2meme; \ chmod +x jaspar2meme /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%@ARCHIVE_REVISION@%1ec0cac75da38ade3bb84e84d35520ca52977940%' -e 's%@ARCHIVE_DATE@%Wed Jan 29 15:00:42 2020 -0800%' -e 's%@ARCHIVE_VERSION@%5.1.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHMONO@%%' -e 's%@WHICHPERL@%/nix/store/qjkhzhzav2bkifw5kis91ckzv9sjjpj7-perl-5.36.0/bin/perl%' -e 's%@WHICHPYTHON@%/nix/store/ar76b3831ydkmfhf0r9v3wbma5i61iz2-python3-3.10.9/bin/python%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%%' -e 's%@PERLLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/perl%' -e 's%@PYTHONLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/python%' -e 's%@JAVALIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1%' -e 's%@BINDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin%' -e 's%@LIBEXECDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1%' -e 's%@MEMELOGS@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/var/meme-5.1.1/LOGS%' -e 's%@MEMEDB@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/db%' -e 's%@SITE_URL@%http://meme-suite.org%g' -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/%' hart2meme-bkg.pl.in > hart2meme-bkg; \ chmod +x hart2meme-bkg /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%@ARCHIVE_REVISION@%1ec0cac75da38ade3bb84e84d35520ca52977940%' -e 's%@ARCHIVE_DATE@%Wed Jan 29 15:00:42 2020 -0800%' -e 's%@ARCHIVE_VERSION@%5.1.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHMONO@%%' -e 's%@WHICHPERL@%/nix/store/qjkhzhzav2bkifw5kis91ckzv9sjjpj7-perl-5.36.0/bin/perl%' -e 's%@WHICHPYTHON@%/nix/store/ar76b3831ydkmfhf0r9v3wbma5i61iz2-python3-3.10.9/bin/python%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%%' -e 's%@PERLLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/perl%' -e 's%@PYTHONLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/python%' -e 's%@JAVALIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1%' -e 's%@BINDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin%' -e 's%@LIBEXECDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1%' -e 's%@MEMELOGS@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/var/meme-5.1.1/LOGS%' -e 's%@MEMEDB@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/db%' -e 's%@SITE_URL@%http://meme-suite.org%g' -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/%' hartemink2psp.pl.in > hartemink2psp; \ chmod +x hartemink2psp /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%@ARCHIVE_REVISION@%1ec0cac75da38ade3bb84e84d35520ca52977940%' -e 's%@ARCHIVE_DATE@%Wed Jan 29 15:00:42 2020 -0800%' -e 's%@ARCHIVE_VERSION@%5.1.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHMONO@%%' -e 's%@WHICHPERL@%/nix/store/qjkhzhzav2bkifw5kis91ckzv9sjjpj7-perl-5.36.0/bin/perl%' -e 's%@WHICHPYTHON@%/nix/store/ar76b3831ydkmfhf0r9v3wbma5i61iz2-python3-3.10.9/bin/python%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%%' -e 's%@PERLLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/perl%' -e 's%@PYTHONLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/python%' -e 's%@JAVALIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1%' -e 's%@BINDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin%' -e 's%@LIBEXECDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1%' -e 's%@MEMELOGS@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/var/meme-5.1.1/LOGS%' -e 's%@MEMEDB@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/db%' -e 's%@SITE_URL@%http://meme-suite.org%g' -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/%' iupac2meme.pl.in > iupac2meme; \ chmod +x iupac2meme /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%@ARCHIVE_REVISION@%1ec0cac75da38ade3bb84e84d35520ca52977940%' -e 's%@ARCHIVE_DATE@%Wed Jan 29 15:00:42 2020 -0800%' -e 's%@ARCHIVE_VERSION@%5.1.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHMONO@%%' -e 's%@WHICHPERL@%/nix/store/qjkhzhzav2bkifw5kis91ckzv9sjjpj7-perl-5.36.0/bin/perl%' -e 's%@WHICHPYTHON@%/nix/store/ar76b3831ydkmfhf0r9v3wbma5i61iz2-python3-3.10.9/bin/python%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%%' -e 's%@PERLLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/perl%' -e 's%@PYTHONLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/python%' -e 's%@JAVALIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1%' -e 's%@BINDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin%' -e 's%@LIBEXECDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1%' -e 's%@MEMELOGS@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/var/meme-5.1.1/LOGS%' -e 's%@MEMEDB@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/db%' -e 's%@SITE_URL@%http://meme-suite.org%g' -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/%' mast_xml_to_html.pl.in > mast_xml_to_html; \ chmod +x mast_xml_to_html /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%@ARCHIVE_REVISION@%1ec0cac75da38ade3bb84e84d35520ca52977940%' -e 's%@ARCHIVE_DATE@%Wed Jan 29 15:00:42 2020 -0800%' -e 's%@ARCHIVE_VERSION@%5.1.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHMONO@%%' -e 's%@WHICHPERL@%/nix/store/qjkhzhzav2bkifw5kis91ckzv9sjjpj7-perl-5.36.0/bin/perl%' -e 's%@WHICHPYTHON@%/nix/store/ar76b3831ydkmfhf0r9v3wbma5i61iz2-python3-3.10.9/bin/python%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%%' -e 's%@PERLLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/perl%' -e 's%@PYTHONLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/python%' -e 's%@JAVALIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1%' -e 's%@BINDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin%' -e 's%@LIBEXECDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1%' -e 's%@MEMELOGS@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/var/meme-5.1.1/LOGS%' -e 's%@MEMEDB@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/db%' -e 's%@SITE_URL@%http://meme-suite.org%g' -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/%' mast_xml_to_txt.pl.in > mast_xml_to_txt; \ chmod +x mast_xml_to_txt /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%@ARCHIVE_REVISION@%1ec0cac75da38ade3bb84e84d35520ca52977940%' -e 's%@ARCHIVE_DATE@%Wed Jan 29 15:00:42 2020 -0800%' -e 's%@ARCHIVE_VERSION@%5.1.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHMONO@%%' -e 's%@WHICHPERL@%/nix/store/qjkhzhzav2bkifw5kis91ckzv9sjjpj7-perl-5.36.0/bin/perl%' -e 's%@WHICHPYTHON@%/nix/store/ar76b3831ydkmfhf0r9v3wbma5i61iz2-python3-3.10.9/bin/python%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%%' -e 's%@PERLLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/perl%' -e 's%@PYTHONLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/python%' -e 's%@JAVALIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1%' -e 's%@BINDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin%' -e 's%@LIBEXECDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1%' -e 's%@MEMELOGS@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/var/meme-5.1.1/LOGS%' -e 's%@MEMEDB@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/db%' -e 's%@SITE_URL@%http://meme-suite.org%g' -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/%' matrix2meme.pl.in > matrix2meme; \ chmod +x matrix2meme /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%@ARCHIVE_REVISION@%1ec0cac75da38ade3bb84e84d35520ca52977940%' -e 's%@ARCHIVE_DATE@%Wed Jan 29 15:00:42 2020 -0800%' -e 's%@ARCHIVE_VERSION@%5.1.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHMONO@%%' -e 's%@WHICHPERL@%/nix/store/qjkhzhzav2bkifw5kis91ckzv9sjjpj7-perl-5.36.0/bin/perl%' -e 's%@WHICHPYTHON@%/nix/store/ar76b3831ydkmfhf0r9v3wbma5i61iz2-python3-3.10.9/bin/python%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%%' -e 's%@PERLLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/perl%' -e 's%@PYTHONLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/python%' -e 's%@JAVALIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1%' -e 's%@BINDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin%' -e 's%@LIBEXECDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1%' -e 's%@MEMELOGS@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/var/meme-5.1.1/LOGS%' -e 's%@MEMEDB@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/db%' -e 's%@SITE_URL@%http://meme-suite.org%g' -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/%' meme-chip_html_to_tsv.pl.in > meme-chip_html_to_tsv; \ chmod +x meme-chip_html_to_tsv /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%@ARCHIVE_REVISION@%1ec0cac75da38ade3bb84e84d35520ca52977940%' -e 's%@ARCHIVE_DATE@%Wed Jan 29 15:00:42 2020 -0800%' -e 's%@ARCHIVE_VERSION@%5.1.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHMONO@%%' -e 's%@WHICHPERL@%/nix/store/qjkhzhzav2bkifw5kis91ckzv9sjjpj7-perl-5.36.0/bin/perl%' -e 's%@WHICHPYTHON@%/nix/store/ar76b3831ydkmfhf0r9v3wbma5i61iz2-python3-3.10.9/bin/python%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%%' -e 's%@PERLLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/perl%' -e 's%@PYTHONLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/python%' -e 's%@JAVALIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1%' -e 's%@BINDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin%' -e 's%@LIBEXECDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1%' -e 's%@MEMELOGS@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/var/meme-5.1.1/LOGS%' -e 's%@MEMEDB@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/db%' -e 's%@SITE_URL@%http://meme-suite.org%g' -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/%' meme-rename.pl.in > meme-rename; \ chmod +x meme-rename /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%@ARCHIVE_REVISION@%1ec0cac75da38ade3bb84e84d35520ca52977940%' -e 's%@ARCHIVE_DATE@%Wed Jan 29 15:00:42 2020 -0800%' -e 's%@ARCHIVE_VERSION@%5.1.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHMONO@%%' -e 's%@WHICHPERL@%/nix/store/qjkhzhzav2bkifw5kis91ckzv9sjjpj7-perl-5.36.0/bin/perl%' -e 's%@WHICHPYTHON@%/nix/store/ar76b3831ydkmfhf0r9v3wbma5i61iz2-python3-3.10.9/bin/python%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%%' -e 's%@PERLLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/perl%' -e 's%@PYTHONLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/python%' -e 's%@JAVALIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1%' -e 's%@BINDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin%' -e 's%@LIBEXECDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1%' -e 's%@MEMELOGS@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/var/meme-5.1.1/LOGS%' -e 's%@MEMEDB@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/db%' -e 's%@SITE_URL@%http://meme-suite.org%g' -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/%' meme_xml_to_html.pl.in > meme_xml_to_html; \ chmod +x meme_xml_to_html /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%@ARCHIVE_REVISION@%1ec0cac75da38ade3bb84e84d35520ca52977940%' -e 's%@ARCHIVE_DATE@%Wed Jan 29 15:00:42 2020 -0800%' -e 's%@ARCHIVE_VERSION@%5.1.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHMONO@%%' -e 's%@WHICHPERL@%/nix/store/qjkhzhzav2bkifw5kis91ckzv9sjjpj7-perl-5.36.0/bin/perl%' -e 's%@WHICHPYTHON@%/nix/store/ar76b3831ydkmfhf0r9v3wbma5i61iz2-python3-3.10.9/bin/python%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%%' -e 's%@PERLLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/perl%' -e 's%@PYTHONLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/python%' -e 's%@JAVALIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1%' -e 's%@BINDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin%' -e 's%@LIBEXECDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1%' -e 's%@MEMELOGS@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/var/meme-5.1.1/LOGS%' -e 's%@MEMEDB@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/db%' -e 's%@SITE_URL@%http://meme-suite.org%g' -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/%' nmica2meme.pl.in > nmica2meme; \ chmod +x nmica2meme /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%@ARCHIVE_REVISION@%1ec0cac75da38ade3bb84e84d35520ca52977940%' -e 's%@ARCHIVE_DATE@%Wed Jan 29 15:00:42 2020 -0800%' -e 's%@ARCHIVE_VERSION@%5.1.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHMONO@%%' -e 's%@WHICHPERL@%/nix/store/qjkhzhzav2bkifw5kis91ckzv9sjjpj7-perl-5.36.0/bin/perl%' -e 's%@WHICHPYTHON@%/nix/store/ar76b3831ydkmfhf0r9v3wbma5i61iz2-python3-3.10.9/bin/python%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%%' -e 's%@PERLLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/perl%' -e 's%@PYTHONLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/python%' -e 's%@JAVALIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1%' -e 's%@BINDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin%' -e 's%@LIBEXECDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1%' -e 's%@MEMELOGS@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/var/meme-5.1.1/LOGS%' -e 's%@MEMEDB@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/db%' -e 's%@SITE_URL@%http://meme-suite.org%g' -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/%' priority2meme.pl.in > priority2meme; \ chmod +x priority2meme /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%@ARCHIVE_REVISION@%1ec0cac75da38ade3bb84e84d35520ca52977940%' -e 's%@ARCHIVE_DATE@%Wed Jan 29 15:00:42 2020 -0800%' -e 's%@ARCHIVE_VERSION@%5.1.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHMONO@%%' -e 's%@WHICHPERL@%/nix/store/qjkhzhzav2bkifw5kis91ckzv9sjjpj7-perl-5.36.0/bin/perl%' -e 's%@WHICHPYTHON@%/nix/store/ar76b3831ydkmfhf0r9v3wbma5i61iz2-python3-3.10.9/bin/python%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%%' -e 's%@PERLLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/perl%' -e 's%@PYTHONLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/python%' -e 's%@JAVALIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1%' -e 's%@BINDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin%' -e 's%@LIBEXECDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1%' -e 's%@MEMELOGS@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/var/meme-5.1.1/LOGS%' -e 's%@MEMEDB@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/db%' -e 's%@SITE_URL@%http://meme-suite.org%g' -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/%' psp-gen.pl.in > psp-gen; \ chmod +x psp-gen /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%@ARCHIVE_REVISION@%1ec0cac75da38ade3bb84e84d35520ca52977940%' -e 's%@ARCHIVE_DATE@%Wed Jan 29 15:00:42 2020 -0800%' -e 's%@ARCHIVE_VERSION@%5.1.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHMONO@%%' -e 's%@WHICHPERL@%/nix/store/qjkhzhzav2bkifw5kis91ckzv9sjjpj7-perl-5.36.0/bin/perl%' -e 's%@WHICHPYTHON@%/nix/store/ar76b3831ydkmfhf0r9v3wbma5i61iz2-python3-3.10.9/bin/python%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%%' -e 's%@PERLLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/perl%' -e 's%@PYTHONLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/python%' -e 's%@JAVALIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1%' -e 's%@BINDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin%' -e 's%@LIBEXECDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1%' -e 's%@MEMELOGS@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/var/meme-5.1.1/LOGS%' -e 's%@MEMEDB@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/db%' -e 's%@SITE_URL@%http://meme-suite.org%g' -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/%' rsat-retrieve-seq.pl.in > rsat-retrieve-seq; \ chmod +x rsat-retrieve-seq /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%@ARCHIVE_REVISION@%1ec0cac75da38ade3bb84e84d35520ca52977940%' -e 's%@ARCHIVE_DATE@%Wed Jan 29 15:00:42 2020 -0800%' -e 's%@ARCHIVE_VERSION@%5.1.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHMONO@%%' -e 's%@WHICHPERL@%/nix/store/qjkhzhzav2bkifw5kis91ckzv9sjjpj7-perl-5.36.0/bin/perl%' -e 's%@WHICHPYTHON@%/nix/store/ar76b3831ydkmfhf0r9v3wbma5i61iz2-python3-3.10.9/bin/python%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%%' -e 's%@PERLLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/perl%' -e 's%@PYTHONLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/python%' -e 's%@JAVALIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1%' -e 's%@BINDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin%' -e 's%@LIBEXECDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1%' -e 's%@MEMELOGS@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/var/meme-5.1.1/LOGS%' -e 's%@MEMEDB@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/db%' -e 's%@SITE_URL@%http://meme-suite.org%g' -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/%' rsat-supported-organisms.pl.in > rsat-supported-organisms; \ chmod +x rsat-supported-organisms /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%@ARCHIVE_REVISION@%1ec0cac75da38ade3bb84e84d35520ca52977940%' -e 's%@ARCHIVE_DATE@%Wed Jan 29 15:00:42 2020 -0800%' -e 's%@ARCHIVE_VERSION@%5.1.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHMONO@%%' -e 's%@WHICHPERL@%/nix/store/qjkhzhzav2bkifw5kis91ckzv9sjjpj7-perl-5.36.0/bin/perl%' -e 's%@WHICHPYTHON@%/nix/store/ar76b3831ydkmfhf0r9v3wbma5i61iz2-python3-3.10.9/bin/python%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%%' -e 's%@PERLLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/perl%' -e 's%@PYTHONLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/python%' -e 's%@JAVALIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1%' -e 's%@BINDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin%' -e 's%@LIBEXECDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1%' -e 's%@MEMELOGS@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/var/meme-5.1.1/LOGS%' -e 's%@MEMEDB@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/db%' -e 's%@SITE_URL@%http://meme-suite.org%g' -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/%' rna2meme.pl.in > rna2meme; \ chmod +x rna2meme /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%@ARCHIVE_REVISION@%1ec0cac75da38ade3bb84e84d35520ca52977940%' -e 's%@ARCHIVE_DATE@%Wed Jan 29 15:00:42 2020 -0800%' -e 's%@ARCHIVE_VERSION@%5.1.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHMONO@%%' -e 's%@WHICHPERL@%/nix/store/qjkhzhzav2bkifw5kis91ckzv9sjjpj7-perl-5.36.0/bin/perl%' -e 's%@WHICHPYTHON@%/nix/store/ar76b3831ydkmfhf0r9v3wbma5i61iz2-python3-3.10.9/bin/python%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%%' -e 's%@PERLLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/perl%' -e 's%@PYTHONLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/python%' -e 's%@JAVALIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1%' -e 's%@BINDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin%' -e 's%@LIBEXECDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1%' -e 's%@MEMELOGS@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/var/meme-5.1.1/LOGS%' -e 's%@MEMEDB@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/db%' -e 's%@SITE_URL@%http://meme-suite.org%g' -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/%' scpd2meme.pl.in > scpd2meme; \ chmod +x scpd2meme /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%@ARCHIVE_REVISION@%1ec0cac75da38ade3bb84e84d35520ca52977940%' -e 's%@ARCHIVE_DATE@%Wed Jan 29 15:00:42 2020 -0800%' -e 's%@ARCHIVE_VERSION@%5.1.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHMONO@%%' -e 's%@WHICHPERL@%/nix/store/qjkhzhzav2bkifw5kis91ckzv9sjjpj7-perl-5.36.0/bin/perl%' -e 's%@WHICHPYTHON@%/nix/store/ar76b3831ydkmfhf0r9v3wbma5i61iz2-python3-3.10.9/bin/python%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%%' -e 's%@PERLLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/perl%' -e 's%@PYTHONLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/python%' -e 's%@JAVALIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1%' -e 's%@BINDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin%' -e 's%@LIBEXECDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1%' -e 's%@MEMELOGS@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/var/meme-5.1.1/LOGS%' -e 's%@MEMEDB@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/db%' -e 's%@SITE_URL@%http://meme-suite.org%g' -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/%' sites2meme.pl.in > sites2meme; \ chmod +x sites2meme /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%@ARCHIVE_REVISION@%1ec0cac75da38ade3bb84e84d35520ca52977940%' -e 's%@ARCHIVE_DATE@%Wed Jan 29 15:00:42 2020 -0800%' -e 's%@ARCHIVE_VERSION@%5.1.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHMONO@%%' -e 's%@WHICHPERL@%/nix/store/qjkhzhzav2bkifw5kis91ckzv9sjjpj7-perl-5.36.0/bin/perl%' -e 's%@WHICHPYTHON@%/nix/store/ar76b3831ydkmfhf0r9v3wbma5i61iz2-python3-3.10.9/bin/python%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%%' -e 's%@PERLLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/perl%' -e 's%@PYTHONLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/python%' -e 's%@JAVALIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1%' -e 's%@BINDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin%' -e 's%@LIBEXECDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1%' -e 's%@MEMELOGS@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/var/meme-5.1.1/LOGS%' -e 's%@MEMEDB@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/db%' -e 's%@SITE_URL@%http://meme-suite.org%g' -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/%' taipale2meme.pl.in > taipale2meme; \ chmod +x taipale2meme /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%@ARCHIVE_REVISION@%1ec0cac75da38ade3bb84e84d35520ca52977940%' -e 's%@ARCHIVE_DATE@%Wed Jan 29 15:00:42 2020 -0800%' -e 's%@ARCHIVE_VERSION@%5.1.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHMONO@%%' -e 's%@WHICHPERL@%/nix/store/qjkhzhzav2bkifw5kis91ckzv9sjjpj7-perl-5.36.0/bin/perl%' -e 's%@WHICHPYTHON@%/nix/store/ar76b3831ydkmfhf0r9v3wbma5i61iz2-python3-3.10.9/bin/python%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%%' -e 's%@PERLLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/perl%' -e 's%@PYTHONLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/python%' -e 's%@JAVALIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1%' -e 's%@BINDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin%' -e 's%@LIBEXECDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1%' -e 's%@MEMELOGS@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/var/meme-5.1.1/LOGS%' -e 's%@MEMEDB@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/db%' -e 's%@SITE_URL@%http://meme-suite.org%g' -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/%' tamo2meme.pl.in > tamo2meme; \ chmod +x tamo2meme /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%@ARCHIVE_REVISION@%1ec0cac75da38ade3bb84e84d35520ca52977940%' -e 's%@ARCHIVE_DATE@%Wed Jan 29 15:00:42 2020 -0800%' -e 's%@ARCHIVE_VERSION@%5.1.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHMONO@%%' -e 's%@WHICHPERL@%/nix/store/qjkhzhzav2bkifw5kis91ckzv9sjjpj7-perl-5.36.0/bin/perl%' -e 's%@WHICHPYTHON@%/nix/store/ar76b3831ydkmfhf0r9v3wbma5i61iz2-python3-3.10.9/bin/python%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%%' -e 's%@PERLLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/perl%' -e 's%@PYTHONLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/python%' -e 's%@JAVALIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1%' -e 's%@BINDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin%' -e 's%@LIBEXECDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1%' -e 's%@MEMELOGS@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/var/meme-5.1.1/LOGS%' -e 's%@MEMEDB@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/db%' -e 's%@SITE_URL@%http://meme-suite.org%g' -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/%' tomtom_xml_to_html.pl.in > tomtom_xml_to_html; \ chmod +x tomtom_xml_to_html /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%@ARCHIVE_REVISION@%1ec0cac75da38ade3bb84e84d35520ca52977940%' -e 's%@ARCHIVE_DATE@%Wed Jan 29 15:00:42 2020 -0800%' -e 's%@ARCHIVE_VERSION@%5.1.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHMONO@%%' -e 's%@WHICHPERL@%/nix/store/qjkhzhzav2bkifw5kis91ckzv9sjjpj7-perl-5.36.0/bin/perl%' -e 's%@WHICHPYTHON@%/nix/store/ar76b3831ydkmfhf0r9v3wbma5i61iz2-python3-3.10.9/bin/python%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%%' -e 's%@PERLLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/perl%' -e 's%@PYTHONLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/python%' -e 's%@JAVALIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1%' -e 's%@BINDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin%' -e 's%@LIBEXECDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1%' -e 's%@MEMELOGS@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/var/meme-5.1.1/LOGS%' -e 's%@MEMEDB@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/db%' -e 's%@SITE_URL@%http://meme-suite.org%g' -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/%' transfac2meme.pl.in > transfac2meme; \ chmod +x transfac2meme /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%@ARCHIVE_REVISION@%1ec0cac75da38ade3bb84e84d35520ca52977940%' -e 's%@ARCHIVE_DATE@%Wed Jan 29 15:00:42 2020 -0800%' -e 's%@ARCHIVE_VERSION@%5.1.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHMONO@%%' -e 's%@WHICHPERL@%/nix/store/qjkhzhzav2bkifw5kis91ckzv9sjjpj7-perl-5.36.0/bin/perl%' -e 's%@WHICHPYTHON@%/nix/store/ar76b3831ydkmfhf0r9v3wbma5i61iz2-python3-3.10.9/bin/python%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%%' -e 's%@PERLLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/perl%' -e 's%@PYTHONLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/python%' -e 's%@JAVALIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1%' -e 's%@BINDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin%' -e 's%@LIBEXECDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1%' -e 's%@MEMELOGS@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/var/meme-5.1.1/LOGS%' -e 's%@MEMEDB@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/db%' -e 's%@SITE_URL@%http://meme-suite.org%g' -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/%' uniprobe2meme.pl.in > uniprobe2meme; \ chmod +x uniprobe2meme /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%@ARCHIVE_REVISION@%1ec0cac75da38ade3bb84e84d35520ca52977940%' -e 's%@ARCHIVE_DATE@%Wed Jan 29 15:00:42 2020 -0800%' -e 's%@ARCHIVE_VERSION@%5.1.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHMONO@%%' -e 's%@WHICHPERL@%/nix/store/qjkhzhzav2bkifw5kis91ckzv9sjjpj7-perl-5.36.0/bin/perl%' -e 's%@WHICHPYTHON@%/nix/store/ar76b3831ydkmfhf0r9v3wbma5i61iz2-python3-3.10.9/bin/python%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%%' -e 's%@PERLLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/perl%' -e 's%@PYTHONLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/python%' -e 's%@JAVALIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1%' -e 's%@BINDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin%' -e 's%@LIBEXECDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1%' -e 's%@MEMELOGS@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/var/meme-5.1.1/LOGS%' -e 's%@MEMEDB@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/db%' -e 's%@SITE_URL@%http://meme-suite.org%g' -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/%' Globals.pm.in > Globals.pm /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%@ARCHIVE_REVISION@%1ec0cac75da38ade3bb84e84d35520ca52977940%' -e 's%@ARCHIVE_DATE@%Wed Jan 29 15:00:42 2020 -0800%' -e 's%@ARCHIVE_VERSION@%5.1.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHMONO@%%' -e 's%@WHICHPERL@%/nix/store/qjkhzhzav2bkifw5kis91ckzv9sjjpj7-perl-5.36.0/bin/perl%' -e 's%@WHICHPYTHON@%/nix/store/ar76b3831ydkmfhf0r9v3wbma5i61iz2-python3-3.10.9/bin/python%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%%' -e 's%@PERLLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/perl%' -e 's%@PYTHONLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/python%' -e 's%@JAVALIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1%' -e 's%@BINDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin%' -e 's%@LIBEXECDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1%' -e 's%@MEMELOGS@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/var/meme-5.1.1/LOGS%' -e 's%@MEMEDB@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/db%' -e 's%@SITE_URL@%http://meme-suite.org%g' -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/%' MemeWebUtils.pm.in > MemeWebUtils.pm /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%@ARCHIVE_REVISION@%1ec0cac75da38ade3bb84e84d35520ca52977940%' -e 's%@ARCHIVE_DATE@%Wed Jan 29 15:00:42 2020 -0800%' -e 's%@ARCHIVE_VERSION@%5.1.1%' -e 's%@TMP_DIR@%%' -e 's%@WHICHMONO@%%' -e 's%@WHICHPERL@%/nix/store/qjkhzhzav2bkifw5kis91ckzv9sjjpj7-perl-5.36.0/bin/perl%' -e 's%@WHICHPYTHON@%/nix/store/ar76b3831ydkmfhf0r9v3wbma5i61iz2-python3-3.10.9/bin/python%' -e 's%@WHICHPYTHON3@%%' -e 's%@WHICHJAVA@%%' -e 's%@WHICHCONVERT@%%' -e 's%@WHICHGHOSTSCRIPT@%%' -e 's%@PERLLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/perl%' -e 's%@PYTHONLIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/python%' -e 's%@JAVALIBDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/java%' -e 's%@LAM_BIN@%%' -e 's%@APPCONFIGDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1%' -e 's%@BINDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin%' -e 's%@LIBEXECDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1%' -e 's%@MEMELOGS@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/var/meme-5.1.1/LOGS%' -e 's%@MEMEDB@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/db%' -e 's%@SITE_URL@%http://meme-suite.org%g' -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%@MAX_TIME@%18000%' -e 's%@DOCDIR@%/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/%' StatusPage.pm.in > StatusPage.pm cp fasta-dinucleotide-shuffle fasta-dinucleotide-shuffle.py cp fasta-hamming-enrich fasta-hamming-enrich.py make[2]: Leaving directory '/build/meme-5.1.1/scripts' Making all in tests make[2]: Entering directory '/build/meme-5.1.1/tests' Making all in ame make[3]: Entering directory '/build/meme-5.1.1/tests/ame' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/meme-5.1.1/tests/ame' Making all in clustalw2fasta make[3]: Entering directory '/build/meme-5.1.1/tests/clustalw2fasta' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/meme-5.1.1/tests/clustalw2fasta' Making all in centrimo make[3]: Entering directory '/build/meme-5.1.1/tests/centrimo' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/meme-5.1.1/tests/centrimo' Making all in common make[3]: Entering directory '/build/meme-5.1.1/tests/common' Making all in motif.crp0 make[4]: Entering directory '/build/meme-5.1.1/tests/common/motif.crp0' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/meme-5.1.1/tests/common/motif.crp0' Making all in motif.Puf3p make[4]: Entering directory '/build/meme-5.1.1/tests/common/motif.Puf3p' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/meme-5.1.1/tests/common/motif.Puf3p' make[4]: Entering directory '/build/meme-5.1.1/tests/common' make[4]: Nothing to be done for 'all-am'. make[4]: Leaving directory '/build/meme-5.1.1/tests/common' make[3]: Leaving directory '/build/meme-5.1.1/tests/common' Making all in create-priors make[3]: Entering directory '/build/meme-5.1.1/tests/create-priors' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/meme-5.1.1/tests/create-priors' Making all in draw-mhmm make[3]: Entering directory '/build/meme-5.1.1/tests/draw-mhmm' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/meme-5.1.1/tests/draw-mhmm' Making all in dreme make[3]: Entering directory '/build/meme-5.1.1/tests/dreme' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/meme-5.1.1/tests/dreme' Making all in fasta-center make[3]: Entering directory '/build/meme-5.1.1/tests/fasta-center' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/meme-5.1.1/tests/fasta-center' Making all in fimo make[3]: Entering directory '/build/meme-5.1.1/tests/fimo' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/meme-5.1.1/tests/fimo' Making all in glam2 make[3]: Entering directory '/build/meme-5.1.1/tests/glam2' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/meme-5.1.1/tests/glam2' Making all in glam2scan make[3]: Entering directory '/build/meme-5.1.1/tests/glam2scan' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/meme-5.1.1/tests/glam2scan' Making all in gomo make[3]: Entering directory '/build/meme-5.1.1/tests/gomo' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/meme-5.1.1/tests/gomo' Making all in mast make[3]: Entering directory '/build/meme-5.1.1/tests/mast' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/meme-5.1.1/tests/mast' Making all in mcast make[3]: Entering directory '/build/meme-5.1.1/tests/mcast' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/meme-5.1.1/tests/mcast' Making all in meme make[3]: Entering directory '/build/meme-5.1.1/tests/meme' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/meme-5.1.1/tests/meme' Making all in meme-chip make[3]: Entering directory '/build/meme-5.1.1/tests/meme-chip' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/meme-5.1.1/tests/meme-chip' Making all in mhmm make[3]: Entering directory '/build/meme-5.1.1/tests/mhmm' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/meme-5.1.1/tests/mhmm' Making all in mhmms make[3]: Entering directory '/build/meme-5.1.1/tests/mhmms' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/meme-5.1.1/tests/mhmms' Making all in momo make[3]: Entering directory '/build/meme-5.1.1/tests/momo' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/meme-5.1.1/tests/momo' Making all in mhmmscan make[3]: Entering directory '/build/meme-5.1.1/tests/mhmmscan' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/meme-5.1.1/tests/mhmmscan' Making all in motiph make[3]: Entering directory '/build/meme-5.1.1/tests/motiph' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/meme-5.1.1/tests/motiph' Making all in psp-gen make[3]: Entering directory '/build/meme-5.1.1/tests/psp-gen' Makefile:515: warning: ignoring prerequisites on suffix rule definition make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/meme-5.1.1/tests/psp-gen' Making all in qvalue make[3]: Entering directory '/build/meme-5.1.1/tests/qvalue' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/meme-5.1.1/tests/qvalue' Making all in scaffold make[3]: Entering directory '/build/meme-5.1.1/tests/scaffold' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/meme-5.1.1/tests/scaffold' Making all in spamo make[3]: Entering directory '/build/meme-5.1.1/tests/spamo' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/meme-5.1.1/tests/spamo' Making all in tgene make[3]: Entering directory '/build/meme-5.1.1/tests/tgene' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/meme-5.1.1/tests/tgene' Making all in tomtom make[3]: Entering directory '/build/meme-5.1.1/tests/tomtom' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/meme-5.1.1/tests/tomtom' Making all in web make[3]: Entering directory '/build/meme-5.1.1/tests/web' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/meme-5.1.1/tests/web' Making all in scripts make[3]: Entering directory '/build/meme-5.1.1/tests/scripts' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/meme-5.1.1/tests/scripts' make[3]: Entering directory '/build/meme-5.1.1/tests' make[3]: Nothing to be done for 'all-am'. make[3]: Leaving directory '/build/meme-5.1.1/tests' make[2]: Leaving directory '/build/meme-5.1.1/tests' Making all in doc make[2]: Entering directory '/build/meme-5.1.1/doc' /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e "/INSERT_COPYING_FILE/r ../COPYING" -e "/INSERT_COPYING_FILE/d" copyright.html.in > copyright.html make all-recursive make[3]: Entering directory '/build/meme-5.1.1/doc' Making all in examples make[4]: Entering directory '/build/meme-5.1.1/doc/examples' Making all in compute_prior_dist_example_output_files make[5]: Entering directory '/build/meme-5.1.1/doc/examples/compute_prior_dist_example_output_files' make[5]: Nothing to be done for 'all'. make[5]: Leaving directory '/build/meme-5.1.1/doc/examples/compute_prior_dist_example_output_files' Making all in sample_opal_scripts make[5]: Entering directory '/build/meme-5.1.1/doc/examples/sample_opal_scripts' make[5]: Nothing to be done for 'all'. make[5]: Leaving directory '/build/meme-5.1.1/doc/examples/sample_opal_scripts' make[5]: Entering directory '/build/meme-5.1.1/doc/examples' /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%@WHICHPERL@%/nix/store/qjkhzhzav2bkifw5kis91ckzv9sjjpj7-perl-5.36.0/bin/perl%' create_examples.pl.in > create_examples; \ chmod +x create_examples make[5]: Leaving directory '/build/meme-5.1.1/doc/examples' make[4]: Leaving directory '/build/meme-5.1.1/doc/examples' Making all in images make[4]: Entering directory '/build/meme-5.1.1/doc/images' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/meme-5.1.1/doc/images' Making all in css make[4]: Entering directory '/build/meme-5.1.1/doc/css' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/meme-5.1.1/doc/css' Making all in js make[4]: Entering directory '/build/meme-5.1.1/doc/js' /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%\@VERSION\@%5.1.1%g' -e 's%\@CONTACT\@%%g' -e 's%\@DEV_CONTACT\@%meme-suite@uw.edu%g' -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%\@SITE_URL\@%http://meme-suite.org%g' -e 's%\@ALT_URL\@%%g' -e 's%\@URL\@%http://meme-suite.org%g' -e 's%\@PREV_URL\@%%g' -e 's%\@PREV_VER\@%%g' -e 's%\@NOTICES_URL\@%./notices.txt%g' -e 's%\@NEWS_URL\@%./news.txt%g' constants.js.in > constants.js /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%\@VERSION\@%5.1.1%g' -e 's%\@CONTACT\@%%g' -e 's%\@DEV_CONTACT\@%meme-suite@uw.edu%g' -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%\@SITE_URL\@%http://meme-suite.org%g' -e 's%\@ALT_URL\@%%g' -e 's%\@URL\@%http://meme-suite.org%g' -e 's%\@PREV_URL\@%%g' -e 's%\@PREV_VER\@%%g' -e 's%\@NOTICES_URL\@%./notices.txt%g' -e 's%\@NEWS_URL\@%./news.txt%g' menu.js.in > menu.js /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%\@VERSION\@%5.1.1%g' -e 's%\@CONTACT\@%%g' -e 's%\@DEV_CONTACT\@%meme-suite@uw.edu%g' -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%\@SITE_URL\@%http://meme-suite.org%g' -e 's%\@ALT_URL\@%%g' -e 's%\@URL\@%http://meme-suite.org%g' -e 's%\@PREV_URL\@%%g' -e 's%\@PREV_VER\@%%g' -e 's%\@NOTICES_URL\@%./notices.txt%g' -e 's%\@NEWS_URL\@%./news.txt%g' menu-configure.js.in > menu-configure.js /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%\@VERSION\@%5.1.1%g' -e 's%\@CONTACT\@%%g' -e 's%\@DEV_CONTACT\@%meme-suite@uw.edu%g' -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%\@SITE_URL\@%http://meme-suite.org%g' -e 's%\@ALT_URL\@%%g' -e 's%\@URL\@%http://meme-suite.org%g' -e 's%\@PREV_URL\@%%g' -e 's%\@PREV_VER\@%%g' -e 's%\@NOTICES_URL\@%./notices.txt%g' -e 's%\@NEWS_URL\@%./news.txt%g' menu-data.js.in > menu-data.js make all-am make[5]: Entering directory '/build/meme-5.1.1/doc/js' make[5]: Nothing to be done for 'all-am'. make[5]: Leaving directory '/build/meme-5.1.1/doc/js' make[4]: Leaving directory '/build/meme-5.1.1/doc/js' make[4]: Entering directory '/build/meme-5.1.1/doc' /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%\@SITE_URL\@%http://meme-suite.org%g' -e 's%\@DEV_CONTACT\@%meme-suite@uw.edu%g' download.html.in > download.html /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%\@SITE_URL\@%http://meme-suite.org%g' -e 's%\@DEV_CONTACT\@%meme-suite@uw.edu%g' general-faq.html.in > general-faq.html /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%\@SITE_URL\@%http://meme-suite.org%g' -e 's%\@DEV_CONTACT\@%meme-suite@uw.edu%g' install.html.in > install.html /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%\@SITE_URL\@%http://meme-suite.org%g' -e 's%\@DEV_CONTACT\@%meme-suite@uw.edu%g' scripting.html.in > scripting.html make[4]: Leaving directory '/build/meme-5.1.1/doc' make[3]: Leaving directory '/build/meme-5.1.1/doc' make[2]: Leaving directory '/build/meme-5.1.1/doc' Making all in etc make[2]: Entering directory '/build/meme-5.1.1/etc' /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%\@SITE_URL\@%http://meme-suite.org%g' -e 's%\@DEV_CONTACT\@%meme-suite@uw.edu%g' -e 's%\@AMIGO_URL\@%http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO_TERM_ID%' ame_template.html.in > ame_template.html /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%\@SITE_URL\@%http://meme-suite.org%g' -e 's%\@DEV_CONTACT\@%meme-suite@uw.edu%g' -e 's%\@AMIGO_URL\@%http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO_TERM_ID%' beadstring.xsl.in > beadstring.xsl /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%\@SITE_URL\@%http://meme-suite.org%g' -e 's%\@DEV_CONTACT\@%meme-suite@uw.edu%g' -e 's%\@AMIGO_URL\@%http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO_TERM_ID%' centrimo_template.html.in > centrimo_template.html /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%\@SITE_URL\@%http://meme-suite.org%g' -e 's%\@DEV_CONTACT\@%meme-suite@uw.edu%g' -e 's%\@AMIGO_URL\@%http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO_TERM_ID%' tgene_template.html.in > tgene_template.html /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%\@SITE_URL\@%http://meme-suite.org%g' -e 's%\@DEV_CONTACT\@%meme-suite@uw.edu%g' -e 's%\@AMIGO_URL\@%http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO_TERM_ID%' constants.js.in > constants.js /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%\@SITE_URL\@%http://meme-suite.org%g' -e 's%\@DEV_CONTACT\@%meme-suite@uw.edu%g' -e 's%\@AMIGO_URL\@%http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO_TERM_ID%' constants.xsl.in > constants.xsl /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed 's%tname%constants.js%' ./xsl-wrapper.in | /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed '5r constants.js' > constants.js.xsl /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%\@SITE_URL\@%http://meme-suite.org%g' -e 's%\@DEV_CONTACT\@%meme-suite@uw.edu%g' -e 's%\@AMIGO_URL\@%http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO_TERM_ID%' dreme_template.html.in > dreme_template.html /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%\@SITE_URL\@%http://meme-suite.org%g' -e 's%\@DEV_CONTACT\@%meme-suite@uw.edu%g' -e 's%\@AMIGO_URL\@%http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO_TERM_ID%' gomo-to-html.xsl.in > gomo-to-html.xsl /nix/store/qjkhzhzav2bkifw5kis91ckzv9sjjpj7-perl-5.36.0/bin/perl ../etc/generate_xsl_icons.pl ../doc/images/gomo_icon.png > icons.xsl /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%\@SITE_URL\@%http://meme-suite.org%g' -e 's%\@DEV_CONTACT\@%meme-suite@uw.edu%g' -e 's%\@AMIGO_URL\@%http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO_TERM_ID%' logging.conf.in > logging.conf /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%\@SITE_URL\@%http://meme-suite.org%g' -e 's%\@DEV_CONTACT\@%meme-suite@uw.edu%g' -e 's%\@AMIGO_URL\@%http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO_TERM_ID%' mast_template.html.in > mast_template.html /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%\@SITE_URL\@%http://meme-suite.org%g' -e 's%\@DEV_CONTACT\@%meme-suite@uw.edu%g' -e 's%\@AMIGO_URL\@%http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO_TERM_ID%' mcast_template.html.in > mcast_template.html /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed 's%tname%meme.css%' ./xsl-wrapper.in | /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed '5r meme.css' > meme.css.xsl /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%\@SITE_URL\@%http://meme-suite.org%g' -e 's%\@DEV_CONTACT\@%meme-suite@uw.edu%g' -e 's%\@AMIGO_URL\@%http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO_TERM_ID%' meme_template.html.in > meme_template.html /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%\@SITE_URL\@%http://meme-suite.org%g' -e 's%\@DEV_CONTACT\@%meme-suite@uw.edu%g' -e 's%\@AMIGO_URL\@%http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO_TERM_ID%' momo_template.html.in > momo_template.html /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%\@SITE_URL\@%http://meme-suite.org%g' -e 's%\@DEV_CONTACT\@%meme-suite@uw.edu%g' -e 's%\@AMIGO_URL\@%http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO_TERM_ID%' meme-chip_template.html.in > meme-chip_template.html /nix/store/qjkhzhzav2bkifw5kis91ckzv9sjjpj7-perl-5.36.0/bin/perl ../etc/generate_js_wrapped_template.pl motif_logo_template template.eps > motif_logo_template.js /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed 's%tname%simple-shared-doc.js%' ./xsl-wrapper.in | /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed '5r simple-shared-doc.js' > simple-shared-doc.js.xsl /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%\@SITE_URL\@%http://meme-suite.org%g' -e 's%\@DEV_CONTACT\@%meme-suite@uw.edu%g' -e 's%\@AMIGO_URL\@%http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO_TERM_ID%' spamo_template.html.in > spamo_template.html /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed -e 's%\@SOURCE_URL\@%http://meme-suite.org%g' -e 's%\@SITE_URL\@%http://meme-suite.org%g' -e 's%\@DEV_CONTACT\@%meme-suite@uw.edu%g' -e 's%\@AMIGO_URL\@%http://amigo.geneontology.org/cgi-bin/amigo/term_details?term=GO_TERM_ID%' tomtom_template.html.in > tomtom_template.html /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed 's%tname%utilities.js%' ./xsl-wrapper.in | /nix/store/kr6p5jwckmfyqk6pay22b8palxpil81l-gnused-4.8/bin/sed '5r utilities.js' > utilities.js.xsl make[2]: Leaving directory '/build/meme-5.1.1/etc' Making all in website make[2]: Entering directory '/build/meme-5.1.1/website' Making all in templates make[3]: Entering directory '/build/meme-5.1.1/website/templates' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/meme-5.1.1/website/templates' make[3]: Entering directory '/build/meme-5.1.1/website' make[3]: Nothing to be done for 'all-am'. make[3]: Leaving directory '/build/meme-5.1.1/website' make[2]: Leaving directory '/build/meme-5.1.1/website' make[2]: Entering directory '/build/meme-5.1.1' make[2]: Leaving directory '/build/meme-5.1.1' make[1]: Leaving directory '/build/meme-5.1.1' buildPhase completed in 3 minutes 13 seconds Running phase: installPhase installing install flags: SHELL=/nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash install make install-recursive make[1]: Entering directory '/build/meme-5.1.1' Making install in src make[2]: Entering directory '/build/meme-5.1.1/src' make install-recursive make[3]: Entering directory '/build/meme-5.1.1/src' Making install in filters make[4]: Entering directory '/build/meme-5.1.1/src/filters' Making install in purge make[5]: Entering directory '/build/meme-5.1.1/src/filters/purge' make[6]: Entering directory '/build/meme-5.1.1/src/filters/purge' /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/mkdir -p '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin' /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../../../libtool --mode=install /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c purge '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin' libtool: install: /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c purge /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin/purge make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/meme-5.1.1/src/filters/purge' make[5]: Leaving directory '/build/meme-5.1.1/src/filters/purge' Making install in dust make[5]: Entering directory '/build/meme-5.1.1/src/filters/dust' make[6]: Entering directory '/build/meme-5.1.1/src/filters/dust' /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/mkdir -p '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin' /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../../../libtool --mode=install /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c dust '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin' libtool: install: /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c dust /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin/dust make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/meme-5.1.1/src/filters/dust' make[5]: Leaving directory '/build/meme-5.1.1/src/filters/dust' make[5]: Entering directory '/build/meme-5.1.1/src/filters' make[6]: Entering directory '/build/meme-5.1.1/src/filters' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/meme-5.1.1/src/filters' make[5]: Leaving directory '/build/meme-5.1.1/src/filters' make[4]: Leaving directory '/build/meme-5.1.1/src/filters' Making install in libxml2 make[4]: Entering directory '/build/meme-5.1.1/src/libxml2' Making install in include make[5]: Entering directory '/build/meme-5.1.1/src/libxml2/include' Making install in . make[6]: Entering directory '/build/meme-5.1.1/src/libxml2/include' make[7]: Entering directory '/build/meme-5.1.1/src/libxml2/include' make[7]: Nothing to be done for 'install-exec-am'. make[7]: Nothing to be done for 'install-data-am'. make[7]: Leaving directory '/build/meme-5.1.1/src/libxml2/include' make[6]: Leaving directory '/build/meme-5.1.1/src/libxml2/include' Making install in libxml make[6]: Entering directory '/build/meme-5.1.1/src/libxml2/include/libxml' make[7]: Entering directory '/build/meme-5.1.1/src/libxml2/include/libxml' make[7]: Nothing to be done for 'install-exec-am'. make[7]: Nothing to be done for 'install-data-am'. make[7]: Leaving directory '/build/meme-5.1.1/src/libxml2/include/libxml' make[6]: Leaving directory '/build/meme-5.1.1/src/libxml2/include/libxml' make[5]: Leaving directory '/build/meme-5.1.1/src/libxml2/include' Making install in . make[5]: Entering directory '/build/meme-5.1.1/src/libxml2' make[6]: Entering directory '/build/meme-5.1.1/src/libxml2' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/meme-5.1.1/src/libxml2' make[5]: Leaving directory '/build/meme-5.1.1/src/libxml2' make[4]: Leaving directory '/build/meme-5.1.1/src/libxml2' Making install in libxslt make[4]: Entering directory '/build/meme-5.1.1/src/libxslt' make[5]: Entering directory '/build/meme-5.1.1/src/libxslt' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/meme-5.1.1/src/libxslt' make[4]: Leaving directory '/build/meme-5.1.1/src/libxslt' Making install in libexslt make[4]: Entering directory '/build/meme-5.1.1/src/libexslt' make[5]: Entering directory '/build/meme-5.1.1/src/libexslt' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/meme-5.1.1/src/libexslt' make[4]: Leaving directory '/build/meme-5.1.1/src/libexslt' Making install in . make[4]: Entering directory '/build/meme-5.1.1/src' make[5]: Entering directory '/build/meme-5.1.1/src' /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/mkdir -p '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin' /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --mode=install /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c ame centrimo fimo glam2 glam2scan gomo mast mcast momo spamo tgene tomtom '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin' libtool: install: /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c ame /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin/ame libtool: install: /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c centrimo /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin/centrimo libtool: install: /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c fimo /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin/fimo libtool: install: /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c glam2 /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin/glam2 libtool: install: /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c glam2scan /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin/glam2scan libtool: install: /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c gomo /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin/gomo libtool: install: /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c mast /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin/mast libtool: install: /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c mcast /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin/mcast libtool: install: /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c momo /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin/momo libtool: install: /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c spamo /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin/spamo libtool: install: /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c tgene /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin/tgene libtool: install: /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c tomtom /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin/tomtom /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/mkdir -p '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1' /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../libtool --mode=install /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c alphtype ama ceqlogo clustalw2fasta clustalw2phylip compute-prior-dist compute-uniform-priors create-priors dtc fasta-get-markov fasta-shuffle-letters fisher_exact fitevd gendb getsize glam2format glam2mask gomo_highlight import-html-template llr meme2alph meme2images meme2meme meme-get-motif motif-shuffle-columns motiph pmp_bf ramen qvalue ranksum_test reconcile-tree-alignment reduce-alignment remove-alignment-gaps xsltproc_lite '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1' libtool: install: /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c alphtype /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/alphtype libtool: install: /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c ama /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/ama libtool: install: /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c ceqlogo /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/ceqlogo libtool: install: /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c clustalw2fasta /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/clustalw2fasta libtool: install: /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c clustalw2phylip /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/clustalw2phylip libtool: install: /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c compute-prior-dist /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/compute-prior-dist libtool: install: /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c compute-uniform-priors /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/compute-uniform-priors libtool: install: /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c create-priors /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/create-priors libtool: install: /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c dtc /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/dtc libtool: install: /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c fasta-get-markov /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/fasta-get-markov libtool: install: /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c fasta-shuffle-letters /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/fasta-shuffle-letters libtool: install: /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c fisher_exact /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/fisher_exact libtool: install: /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c fitevd /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/fitevd libtool: install: /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c gendb /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/gendb libtool: install: /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c getsize /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/getsize libtool: install: /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c glam2format /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/glam2format libtool: install: /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c glam2mask /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/glam2mask libtool: install: /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c gomo_highlight /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/gomo_highlight libtool: install: /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c import-html-template /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/import-html-template libtool: install: /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c llr /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/llr libtool: install: /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c meme2alph /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/meme2alph libtool: install: /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c meme2images /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/meme2images libtool: install: /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c meme2meme /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/meme2meme libtool: install: /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c meme-get-motif /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/meme-get-motif libtool: install: /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c motif-shuffle-columns /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/motif-shuffle-columns libtool: install: /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c motiph /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/motiph libtool: install: /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c pmp_bf /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/pmp_bf libtool: install: /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c ramen /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/ramen libtool: install: /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c qvalue /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/qvalue libtool: install: /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c ranksum_test /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/ranksum_test libtool: install: /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c reconcile-tree-alignment /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/reconcile-tree-alignment libtool: install: /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c reduce-alignment /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/reduce-alignment libtool: install: /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c remove-alignment-gaps /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/remove-alignment-gaps libtool: install: /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c xsltproc_lite /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/xsltproc_lite make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/meme-5.1.1/src' make[4]: Leaving directory '/build/meme-5.1.1/src' Making install in parallel make[4]: Entering directory '/build/meme-5.1.1/src/parallel' make[5]: Entering directory '/build/meme-5.1.1/src/parallel' /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/mkdir -p '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin' /nix/store/m45cjiwspshg01wrk2pln2qndasky23r-bash-5.1-p16/bin/bash ../../libtool --mode=install /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c meme '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin' libtool: install: /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c meme /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin/meme make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/meme-5.1.1/src/parallel' make[4]: Leaving directory '/build/meme-5.1.1/src/parallel' make[3]: Leaving directory '/build/meme-5.1.1/src' make[2]: Leaving directory '/build/meme-5.1.1/src' Making install in scripts make[2]: Entering directory '/build/meme-5.1.1/scripts' make[3]: Entering directory '/build/meme-5.1.1/scripts' /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/mkdir -p '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin' /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c meme-chip dreme '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin' /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/mkdir -p '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1' /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c fasta-grep plotgen sd ama-qvalues beeml2meme dreme_xml_to_html dreme_xml_to_txt elm2meme fasta-center fasta-dinucleotide-shuffle fasta-fetch fasta-hamming-enrich fasta-make-index fasta-most fasta-re-match fasta-subsample fasta-unique-names glam2html glam2psfm glam2scan2html chen2meme jaspar2meme hart2meme-bkg hartemink2psp iupac2meme mast_xml_to_html mast_xml_to_txt matrix2meme meme-chip_html_to_tsv meme-rename meme_xml_to_html nmica2meme priority2meme psp-gen rsat-retrieve-seq rsat-supported-organisms rna2meme scpd2meme sites2meme taipale2meme '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1' /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c tamo2meme tomtom_xml_to_html transfac2meme uniprobe2meme fasta-dinucleotide-shuffle fasta-hamming-enrich '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1' /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/mkdir -p '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/perl' /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c Globals.pm MemeWebUtils.pm StatusPage.pm Alphabet.pm CheckingSAX.pm DremeSAX.pm ExecUtils.pm HtmlMonolithWr.pm JsonRdr.pm JsonWr.pm MastSAX.pm MemeSAX.pm MotifInDremeXML.pm MotifInMemeXML.pm MotifUtils.pm PriorUtils.pm ReadFastaFile.pm TomtomSAX.pm '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/perl' /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/mkdir -p '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/python' /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c fasta-dinucleotide-shuffle.py fasta-hamming-enrich.py '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib/meme-5.1.1/python' make[3]: Leaving directory '/build/meme-5.1.1/scripts' make[2]: Leaving directory '/build/meme-5.1.1/scripts' Making install in tests make[2]: Entering directory '/build/meme-5.1.1/tests' Making install in ame make[3]: Entering directory '/build/meme-5.1.1/tests/ame' make[4]: Entering directory '/build/meme-5.1.1/tests/ame' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/meme-5.1.1/tests/ame' make[3]: Leaving directory '/build/meme-5.1.1/tests/ame' Making install in clustalw2fasta make[3]: Entering directory '/build/meme-5.1.1/tests/clustalw2fasta' make[4]: Entering directory '/build/meme-5.1.1/tests/clustalw2fasta' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/meme-5.1.1/tests/clustalw2fasta' make[3]: Leaving directory '/build/meme-5.1.1/tests/clustalw2fasta' Making install in centrimo make[3]: Entering directory '/build/meme-5.1.1/tests/centrimo' make[4]: Entering directory '/build/meme-5.1.1/tests/centrimo' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/meme-5.1.1/tests/centrimo' make[3]: Leaving directory '/build/meme-5.1.1/tests/centrimo' Making install in common make[3]: Entering directory '/build/meme-5.1.1/tests/common' Making install in motif.crp0 make[4]: Entering directory '/build/meme-5.1.1/tests/common/motif.crp0' make[5]: Entering directory '/build/meme-5.1.1/tests/common/motif.crp0' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/meme-5.1.1/tests/common/motif.crp0' make[4]: Leaving directory '/build/meme-5.1.1/tests/common/motif.crp0' Making install in motif.Puf3p make[4]: Entering directory '/build/meme-5.1.1/tests/common/motif.Puf3p' make[5]: Entering directory '/build/meme-5.1.1/tests/common/motif.Puf3p' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/meme-5.1.1/tests/common/motif.Puf3p' make[4]: Leaving directory '/build/meme-5.1.1/tests/common/motif.Puf3p' make[4]: Entering directory '/build/meme-5.1.1/tests/common' make[5]: Entering directory '/build/meme-5.1.1/tests/common' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/meme-5.1.1/tests/common' make[4]: Leaving directory '/build/meme-5.1.1/tests/common' make[3]: Leaving directory '/build/meme-5.1.1/tests/common' Making install in create-priors make[3]: Entering directory '/build/meme-5.1.1/tests/create-priors' make[4]: Entering directory '/build/meme-5.1.1/tests/create-priors' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/meme-5.1.1/tests/create-priors' make[3]: Leaving directory '/build/meme-5.1.1/tests/create-priors' Making install in draw-mhmm make[3]: Entering directory '/build/meme-5.1.1/tests/draw-mhmm' make[4]: Entering directory '/build/meme-5.1.1/tests/draw-mhmm' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/meme-5.1.1/tests/draw-mhmm' make[3]: Leaving directory '/build/meme-5.1.1/tests/draw-mhmm' Making install in dreme make[3]: Entering directory '/build/meme-5.1.1/tests/dreme' make[4]: Entering directory '/build/meme-5.1.1/tests/dreme' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/meme-5.1.1/tests/dreme' make[3]: Leaving directory '/build/meme-5.1.1/tests/dreme' Making install in fasta-center make[3]: Entering directory '/build/meme-5.1.1/tests/fasta-center' make[4]: Entering directory '/build/meme-5.1.1/tests/fasta-center' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/meme-5.1.1/tests/fasta-center' make[3]: Leaving directory '/build/meme-5.1.1/tests/fasta-center' Making install in fimo make[3]: Entering directory '/build/meme-5.1.1/tests/fimo' make[4]: Entering directory '/build/meme-5.1.1/tests/fimo' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/meme-5.1.1/tests/fimo' make[3]: Leaving directory '/build/meme-5.1.1/tests/fimo' Making install in glam2 make[3]: Entering directory '/build/meme-5.1.1/tests/glam2' make[4]: Entering directory '/build/meme-5.1.1/tests/glam2' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/meme-5.1.1/tests/glam2' make[3]: Leaving directory '/build/meme-5.1.1/tests/glam2' Making install in glam2scan make[3]: Entering directory '/build/meme-5.1.1/tests/glam2scan' make[4]: Entering directory '/build/meme-5.1.1/tests/glam2scan' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/meme-5.1.1/tests/glam2scan' make[3]: Leaving directory '/build/meme-5.1.1/tests/glam2scan' Making install in gomo make[3]: Entering directory '/build/meme-5.1.1/tests/gomo' make[4]: Entering directory '/build/meme-5.1.1/tests/gomo' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/meme-5.1.1/tests/gomo' make[3]: Leaving directory '/build/meme-5.1.1/tests/gomo' Making install in mast make[3]: Entering directory '/build/meme-5.1.1/tests/mast' make[4]: Entering directory '/build/meme-5.1.1/tests/mast' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/meme-5.1.1/tests/mast' make[3]: Leaving directory '/build/meme-5.1.1/tests/mast' Making install in mcast make[3]: Entering directory '/build/meme-5.1.1/tests/mcast' make[4]: Entering directory '/build/meme-5.1.1/tests/mcast' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/meme-5.1.1/tests/mcast' make[3]: Leaving directory '/build/meme-5.1.1/tests/mcast' Making install in meme make[3]: Entering directory '/build/meme-5.1.1/tests/meme' make[4]: Entering directory '/build/meme-5.1.1/tests/meme' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/meme-5.1.1/tests/meme' make[3]: Leaving directory '/build/meme-5.1.1/tests/meme' Making install in meme-chip make[3]: Entering directory '/build/meme-5.1.1/tests/meme-chip' make[4]: Entering directory '/build/meme-5.1.1/tests/meme-chip' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/meme-5.1.1/tests/meme-chip' make[3]: Leaving directory '/build/meme-5.1.1/tests/meme-chip' Making install in mhmm make[3]: Entering directory '/build/meme-5.1.1/tests/mhmm' make[4]: Entering directory '/build/meme-5.1.1/tests/mhmm' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/meme-5.1.1/tests/mhmm' make[3]: Leaving directory '/build/meme-5.1.1/tests/mhmm' Making install in mhmms make[3]: Entering directory '/build/meme-5.1.1/tests/mhmms' make[4]: Entering directory '/build/meme-5.1.1/tests/mhmms' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/meme-5.1.1/tests/mhmms' make[3]: Leaving directory '/build/meme-5.1.1/tests/mhmms' Making install in momo make[3]: Entering directory '/build/meme-5.1.1/tests/momo' make[4]: Entering directory '/build/meme-5.1.1/tests/momo' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/meme-5.1.1/tests/momo' make[3]: Leaving directory '/build/meme-5.1.1/tests/momo' Making install in mhmmscan make[3]: Entering directory '/build/meme-5.1.1/tests/mhmmscan' make[4]: Entering directory '/build/meme-5.1.1/tests/mhmmscan' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/meme-5.1.1/tests/mhmmscan' make[3]: Leaving directory '/build/meme-5.1.1/tests/mhmmscan' Making install in motiph make[3]: Entering directory '/build/meme-5.1.1/tests/motiph' make[4]: Entering directory '/build/meme-5.1.1/tests/motiph' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/meme-5.1.1/tests/motiph' make[3]: Leaving directory '/build/meme-5.1.1/tests/motiph' Making install in psp-gen make[3]: Entering directory '/build/meme-5.1.1/tests/psp-gen' Makefile:515: warning: ignoring prerequisites on suffix rule definition make[4]: Entering directory '/build/meme-5.1.1/tests/psp-gen' Makefile:515: warning: ignoring prerequisites on suffix rule definition make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/meme-5.1.1/tests/psp-gen' make[3]: Leaving directory '/build/meme-5.1.1/tests/psp-gen' Making install in qvalue make[3]: Entering directory '/build/meme-5.1.1/tests/qvalue' make[4]: Entering directory '/build/meme-5.1.1/tests/qvalue' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/meme-5.1.1/tests/qvalue' make[3]: Leaving directory '/build/meme-5.1.1/tests/qvalue' Making install in scaffold make[3]: Entering directory '/build/meme-5.1.1/tests/scaffold' make[4]: Entering directory '/build/meme-5.1.1/tests/scaffold' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/meme-5.1.1/tests/scaffold' make[3]: Leaving directory '/build/meme-5.1.1/tests/scaffold' Making install in spamo make[3]: Entering directory '/build/meme-5.1.1/tests/spamo' make[4]: Entering directory '/build/meme-5.1.1/tests/spamo' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/meme-5.1.1/tests/spamo' make[3]: Leaving directory '/build/meme-5.1.1/tests/spamo' Making install in tgene make[3]: Entering directory '/build/meme-5.1.1/tests/tgene' make[4]: Entering directory '/build/meme-5.1.1/tests/tgene' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/meme-5.1.1/tests/tgene' make[3]: Leaving directory '/build/meme-5.1.1/tests/tgene' Making install in tomtom make[3]: Entering directory '/build/meme-5.1.1/tests/tomtom' make[4]: Entering directory '/build/meme-5.1.1/tests/tomtom' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/meme-5.1.1/tests/tomtom' make[3]: Leaving directory '/build/meme-5.1.1/tests/tomtom' Making install in web make[3]: Entering directory '/build/meme-5.1.1/tests/web' make[4]: Entering directory '/build/meme-5.1.1/tests/web' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/meme-5.1.1/tests/web' make[3]: Leaving directory '/build/meme-5.1.1/tests/web' Making install in scripts make[3]: Entering directory '/build/meme-5.1.1/tests/scripts' make[4]: Entering directory '/build/meme-5.1.1/tests/scripts' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/meme-5.1.1/tests/scripts' make[3]: Leaving directory '/build/meme-5.1.1/tests/scripts' make[3]: Entering directory '/build/meme-5.1.1/tests' make[4]: Entering directory '/build/meme-5.1.1/tests' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/meme-5.1.1/tests' make[3]: Leaving directory '/build/meme-5.1.1/tests' make[2]: Leaving directory '/build/meme-5.1.1/tests' Making install in doc make[2]: Entering directory '/build/meme-5.1.1/doc' make install-recursive make[3]: Entering directory '/build/meme-5.1.1/doc' Making install in examples make[4]: Entering directory '/build/meme-5.1.1/doc/examples' Making install in compute_prior_dist_example_output_files make[5]: Entering directory '/build/meme-5.1.1/doc/examples/compute_prior_dist_example_output_files' make[6]: Entering directory '/build/meme-5.1.1/doc/examples/compute_prior_dist_example_output_files' make[6]: Nothing to be done for 'install-exec-am'. /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/mkdir -p '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/examples/compute_prior_dist_example_output_files' /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c -m 644 prior.dist.txt '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/examples/compute_prior_dist_example_output_files' make[6]: Leaving directory '/build/meme-5.1.1/doc/examples/compute_prior_dist_example_output_files' make[5]: Leaving directory '/build/meme-5.1.1/doc/examples/compute_prior_dist_example_output_files' Making install in sample_opal_scripts make[5]: Entering directory '/build/meme-5.1.1/doc/examples/sample_opal_scripts' make[6]: Entering directory '/build/meme-5.1.1/doc/examples/sample_opal_scripts' make[6]: Nothing to be done for 'install-exec-am'. /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/mkdir -p '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/examples/sample_opal_scripts' /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c -m 644 crp0.fasta crp0.meme.xml FimoClient.pl FimoClient.py MemeClient.pl MemeClient.py '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/examples/sample_opal_scripts' make[6]: Leaving directory '/build/meme-5.1.1/doc/examples/sample_opal_scripts' make[5]: Leaving directory '/build/meme-5.1.1/doc/examples/sample_opal_scripts' make[5]: Entering directory '/build/meme-5.1.1/doc/examples' make[6]: Entering directory '/build/meme-5.1.1/doc/examples' make[6]: Nothing to be done for 'install-exec-am'. /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/mkdir -p '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/examples' /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/mkdir -p '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/examples/glam2_example_output_files' /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c -m 644 glam2_example_output_files/logo_ssc9.png glam2_example_output_files/logo_ssc1.eps glam2_example_output_files/logo_ssc8.png glam2_example_output_files/logo_ssc3.eps glam2_example_output_files/logo_ssc2.eps glam2_example_output_files/logo10.png glam2_example_output_files/logo_ssc6.eps glam2_example_output_files/glam2.html glam2_example_output_files/logo_ssc7.eps glam2_example_output_files/logo_ssc5.eps glam2_example_output_files/logo_ssc4.eps glam2_example_output_files/logo9.png glam2_example_output_files/logo1.eps glam2_example_output_files/logo8.png glam2_example_output_files/logo3.eps glam2_example_output_files/logo2.eps glam2_example_output_files/glam2.meme glam2_example_output_files/logo6.eps glam2_example_output_files/logo7.eps glam2_example_output_files/logo_ssc10.png glam2_example_output_files/logo5.eps glam2_example_output_files/logo4.eps glam2_example_output_files/logo9.eps glam2_example_output_files/logo8.eps glam2_example_output_files/logo1.png glam2_example_output_files/logo3.png glam2_example_output_files/logo2.png glam2_example_output_files/logo6.png glam2_example_output_files/logo7.png glam2_example_output_files/logo5.png glam2_example_output_files/logo_ssc10.eps glam2_example_output_files/logo4.png glam2_example_output_files/logo_ssc9.eps glam2_example_output_files/logo_ssc8.eps glam2_example_output_files/logo_ssc1.png glam2_example_output_files/logo_ssc3.png glam2_example_output_files/logo_ssc2.png glam2_example_output_files/logo_ssc6.png glam2_example_output_files/logo10.eps glam2_example_output_files/glam2.txt '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/examples/glam2_example_output_files' /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/mkdir -p '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/examples/memechip_example_output_files/spamo_out_1' /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c -m 644 memechip_example_output_files/spamo_out_1/spamo.tsv memechip_example_output_files/spamo_out_1/spamo.html '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/examples/memechip_example_output_files/spamo_out_1' /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/mkdir -p '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/examples/meme_example_output_files' 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/nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c -m 644 memechip_example_output_files/spamo_out_2/spamo.tsv memechip_example_output_files/spamo_out_2/spamo.html '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/examples/memechip_example_output_files/spamo_out_2' /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/mkdir -p '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/examples/motiph_example_output_files' /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c -m 644 motiph_example_output_files/cisml-to-html.xsl motiph_example_output_files/motiph.txt motiph_example_output_files/motiph.html motiph_example_output_files/cisml.css motiph_example_output_files/motiph.gff motiph_example_output_files/motiph.xml '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/examples/motiph_example_output_files' 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'/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/examples/memechip_example_output_files/spamo_out_4' /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/mkdir -p '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/examples/fimo_example_output_files' /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c -m 644 fimo_example_output_files/fimo.tsv fimo_example_output_files/fimo.xml fimo_example_output_files/fimo.gff fimo_example_output_files/fimo.html fimo_example_output_files/cisml.xml '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/examples/fimo_example_output_files' /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/mkdir -p '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/examples/dreme_example_output_files' /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c -m 644 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dreme_example_output_files/m12nc_CAGMCAC.png dreme_example_output_files/m04nc_RARGAAA.png dreme_example_output_files/m11rc_GGARATG.png dreme_example_output_files/m01rc_GGGYGKGG.png dreme_example_output_files/m03rc_TGGGYGK.png dreme_example_output_files/dreme.txt dreme_example_output_files/m05nc_AKAAAM.png dreme_example_output_files/m14rc_TCYCCAG.png dreme_example_output_files/m01nc_CCMCRCCC.png dreme_example_output_files/m03nc_MCRCCCA.png dreme_example_output_files/m15rc_TCACGTS.png '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/examples/dreme_example_output_files' /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/mkdir -p '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/examples/example-datasets' /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c -m 644 example-datasets/crp0.fna example-datasets/Klf1.fna example-datasets/At.faa example-datasets/lex0.fna example-datasets/dpinteract.meme example-datasets/some_vertebrates.meme example-datasets/Klf1.meme example-datasets/dpinteract_subset.meme example-datasets/mm9_tss_500bp_sampled_1000.fna example-datasets/P300.chr21.bed example-datasets/adh.meme example-datasets/adh.faa example-datasets/crp0.meme example-datasets/At.glam2 example-datasets/STRGGTCAN.meme '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/examples/example-datasets' /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/mkdir -p '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/examples/memechip_example_output_files/spamo_out_5' /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c -m 644 memechip_example_output_files/spamo_out_5/spamo.tsv memechip_example_output_files/spamo_out_5/spamo.html '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/examples/memechip_example_output_files/spamo_out_5' 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memechip_example_output_files/fimo_out_2/cisml.xml '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/examples/memechip_example_output_files/fimo_out_2' /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/mkdir -p '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/examples/memechip_example_output_files/dreme_out' /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c -m 644 memechip_example_output_files/dreme_out/m01nc_MCRCCCW.png memechip_example_output_files/dreme_out/m02nc_TTATCW.png memechip_example_output_files/dreme_out/dreme.xml memechip_example_output_files/dreme_out/dreme.html memechip_example_output_files/dreme_out/m01rc_WGGGYGK.png memechip_example_output_files/dreme_out/dreme.txt memechip_example_output_files/dreme_out/m02rc_WGATAA.png '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/examples/memechip_example_output_files/dreme_out' 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'/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/examples/memechip_example_output_files/meme_out' /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/mkdir -p '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/examples/memechip_example_output_files/fimo_out_4' /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c -m 644 memechip_example_output_files/fimo_out_4/fimo.tsv memechip_example_output_files/fimo_out_4/fimo.xml memechip_example_output_files/fimo_out_4/fimo.gff memechip_example_output_files/fimo_out_4/fimo.html memechip_example_output_files/fimo_out_4/cisml.xml '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/examples/memechip_example_output_files/fimo_out_4' /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/mkdir -p '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/examples/memechip_example_output_files/fimo_out_5' /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c -m 644 memechip_example_output_files/fimo_out_5/fimo.tsv memechip_example_output_files/fimo_out_5/fimo.xml memechip_example_output_files/fimo_out_5/fimo.gff memechip_example_output_files/fimo_out_5/fimo.html memechip_example_output_files/fimo_out_5/cisml.xml '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/examples/memechip_example_output_files/fimo_out_5' /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/mkdir -p '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/examples/memechip_example_output_files/meme_tomtom_out' /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c -m 644 memechip_example_output_files/meme_tomtom_out/tomtom.html 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/nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c -m 644 spamo_example_output_files/spamo.tsv spamo_example_output_files/spamo.html '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/examples/spamo_example_output_files' /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/mkdir -p '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/examples/memechip_example_output_files/fimo_out_6' /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c -m 644 memechip_example_output_files/fimo_out_6/fimo.tsv memechip_example_output_files/fimo_out_6/fimo.xml memechip_example_output_files/fimo_out_6/fimo.gff memechip_example_output_files/fimo_out_6/fimo.html memechip_example_output_files/fimo_out_6/cisml.xml '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/examples/memechip_example_output_files/fimo_out_6' 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/nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/mkdir -p '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/js' /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c -m 644 Markdown.Converter.js Markdown.Converter.LICENSE manual.js menu-path.js shared-doc.js constants.js menu.js menu-configure.js menu-data.js constants.js.in centrimo_graph.js tgene_doc.js delay_draw.js eps_context.js motif_logo.js simple-shared-doc.js spamo_graph.js utilities.js '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc/js' make[6]: Leaving directory '/build/meme-5.1.1/doc/js' make[5]: Leaving directory '/build/meme-5.1.1/doc/js' make[4]: Leaving directory '/build/meme-5.1.1/doc/js' make[4]: Entering directory '/build/meme-5.1.1/doc' make[5]: Entering directory '/build/meme-5.1.1/doc' make[5]: Nothing to be done for 'install-exec-am'. /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/mkdir -p '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc' /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c -m 644 ../etc/prior30.plib alphabets.html alphabet-format.html alphtype.html ama.html ama-qvalues.html ame.html ame-output-format.html ame-tutorial.html authors.html beadstring.html beeml2meme.html bfile-format.html centrimo.html centrimo-output-format.html centrimo-tutorial.html tgene.html tgene-tutorial.html ceqlogo.html chen2meme.html tgene-output-format.html cite.html clustalw2fasta.html clustalw2phylip.html clustalw-format.html compute-prior-dist.html compute-uniform-priors.html copyright.html create-priors.html dmix-format.html draw-mhmm.html dreme.html dreme-tutorial.html dust.html elm2meme.html fasta-center.html fasta-dinucleotide-shuffle.html fasta-fetch.html fasta-format.html fasta-get-markov.html '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc' /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c -m 644 fasta-grep.html fasta-hamming-enrich.html fasta-io.html fasta-make-index.html fasta-most.html fasta-shuffle-letters.html fasta-subsample.html fasta-unique-names.html fimo.html fimo-output-format.html fimo-tutorial.html fisher_exact.html fitevd.html gendb.html getsize.html glam2.html glam2format.html glam2mask.html glam2scan.html glam2_alphabet.html glam2_tut.html GLAM2_method.pdf godag-format.html gomo.html gomo-output-format.html gomo_highlight.html iupac.html iupac2meme.html jaspar2meme.html log-hmm.html mast.html matrix2meme.html mcast.html mcast-output-format.html meme.html meme2alph.html meme-chip.html meme-chip-output-format.html meme-format.html meme-get-motif.html '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc' /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c -m 644 meme-rename.html meme2images.html meme2meme.html mhmme.html mhmm.html mhmm2html.html mhmm-format.html mhmmscan.html mhmmscan-format.html mhmms.html momo.html momo-output-format.html motif-shuffle-columns.html motif-consensus.html motif_conversion.html motiph.html nmica2meme.html overview.html pmp_bf.html priority2meme.html psm-format.html psp-format.html psp-gen.html purge.html qvalue.html reconcile-tree-alignment.html reduce-alignment.html release-notes.html remove-alignment-gaps.html rna2meme.html scpd2meme.html shadow.html sites2meme.html spamo.html spamo-output-format.html taipale2meme.html tamo2meme.html tomtom.html tomtom-output-format.html transfac2meme.html '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc' /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c -m 644 transfac-format.html uniprobe2meme.html update-sequence-db.html ismb94.pdf download.html general-faq.html install.html scripting.html '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/doc' make[5]: Leaving directory '/build/meme-5.1.1/doc' make[4]: Leaving directory '/build/meme-5.1.1/doc' make[3]: Leaving directory '/build/meme-5.1.1/doc' make[2]: Leaving directory '/build/meme-5.1.1/doc' Making install in etc make[2]: Entering directory '/build/meme-5.1.1/etc' make[3]: Entering directory '/build/meme-5.1.1/etc' make[3]: Nothing to be done for 'install-exec-am'. /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/mkdir -p '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1' /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c -m 644 db_general.csv db_other_genomes.csv alphabet_utilities.js ame_icon.png ame_template.css ame_template.js block_diagram.css block_diagram.js centrimo_graph.js centrimo_icon.png centrimo_template.css centrimo_template.js tgene_doc.js tgene_icon.png tgene_template.css tgene_template.js cisml.css cisml-to-gff.xsl cisml-to-gff3.xsl cisml-to-html.xsl cisml-to-text.xsl delay_draw.js dreme_icon.png dreme_template.css dreme_template.js eps_context.js generate_js_wrapped_template.pl generate_xsl_icons.pl hmm-text.xsl job_status.tmpl mast_icon.png mast_template.css mast_template.js mcast_icon.png mcast_template.css mcast_template.js meme.css meme_icon.png meme_template.css meme_template.js '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1' /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c -m 644 momo_icon.png momo_template.css momo_template.js memechip_icon.png meme-chip_template.css meme-chip_template.js motif_logo.js new_icon.png prior1.plib prior30.plib simple-shared-doc.js spamo_graph.js spamo_icon.png spamo_template.css spamo_template.js template.eps tomtom_icon.png tomtom_template.css tomtom_template.js utilities.js ame_template.html beadstring.xsl centrimo_template.html tgene_template.html constants.js constants.xsl constants.js.xsl dreme_template.html gomo-to-html.xsl icons.xsl logging.conf mast_template.html mcast_template.html meme.css.xsl meme_template.html momo_template.html meme-chip_template.html motif_logo_template.js simple-shared-doc.js.xsl spamo_template.html '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1' /nix/store/wcckxdl0i7k2kxhzj0ii23s6096n40jh-coreutils-9.1/bin/install -c -m 644 tomtom_template.html utilities.js.xsl '/nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1' make[3]: Leaving directory '/build/meme-5.1.1/etc' make[2]: Leaving directory '/build/meme-5.1.1/etc' Making install in website make[2]: Entering directory '/build/meme-5.1.1/website' Making install in templates make[3]: Entering directory '/build/meme-5.1.1/website/templates' make[4]: Entering directory '/build/meme-5.1.1/website/templates' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/meme-5.1.1/website/templates' make[3]: Leaving directory '/build/meme-5.1.1/website/templates' make[3]: Entering directory '/build/meme-5.1.1/website' make[4]: Entering directory '/build/meme-5.1.1/website' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/meme-5.1.1/website' make[3]: Leaving directory '/build/meme-5.1.1/website' make[2]: Leaving directory '/build/meme-5.1.1/website' make[2]: Entering directory '/build/meme-5.1.1' make[3]: Entering directory '/build/meme-5.1.1' make[3]: Nothing to be done for 'install-exec-am'. make install-data-hook make[4]: Entering directory '/build/meme-5.1.1' mkdir -p /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/share/meme-5.1.1/db make[4]: Leaving directory '/build/meme-5.1.1' make[3]: Leaving directory '/build/meme-5.1.1' make[2]: Leaving directory '/build/meme-5.1.1' make[1]: Leaving directory '/build/meme-5.1.1' Running phase: fixupPhase post-installation fixup shrinking RPATHs of ELF executables and libraries in /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1 shrinking /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin/spamo shrinking /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin/tomtom shrinking /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin/gomo shrinking /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin/dust shrinking /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin/tgene shrinking /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin/glam2scan shrinking /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin/ame shrinking /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin/meme shrinking /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin/momo shrinking /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin/centrimo shrinking /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin/mcast shrinking /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin/glam2 shrinking /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin/purge shrinking /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin/mast shrinking /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin/fimo shrinking /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/fasta-get-markov shrinking /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/glam2mask shrinking /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/glam2format shrinking /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/compute-uniform-priors shrinking /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/gendb shrinking /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/xsltproc_lite shrinking /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/meme2images shrinking /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/fasta-shuffle-letters shrinking /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/fisher_exact shrinking /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/gomo_highlight shrinking /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/dtc shrinking /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/llr shrinking /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/getsize shrinking /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/ceqlogo shrinking /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/motiph shrinking /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/clustalw2phylip shrinking /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/ramen shrinking /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/import-html-template shrinking /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/remove-alignment-gaps shrinking /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/compute-prior-dist shrinking /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/meme2meme shrinking /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/create-priors shrinking /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/meme2alph shrinking /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/ranksum_test shrinking /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/clustalw2fasta shrinking /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/alphtype shrinking /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/reduce-alignment shrinking /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/meme-get-motif shrinking /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/reconcile-tree-alignment shrinking /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/fitevd shrinking /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/pmp_bf shrinking /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/ama shrinking /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/qvalue shrinking /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec/meme-5.1.1/motif-shuffle-columns strip is /nix/store/jm6gqq369d0vd9pz3b7swn2vyycygdb9-gcc-wrapper-9.5.0/bin/strip stripping (with command strip and flags -S) in /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/lib /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/libexec /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1/bin patching script interpreter paths in /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1 checking for references to /build/ in /nix/store/ic4ahlg7kfy0xj97kzf8xw5g9lvva378-meme-suite-5.1.1...